Sigmoidin C

Details

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Internal ID 01c8afcf-7c18-485f-9a58-aab582309ea0
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Pyranoflavonoids
IUPAC Name (2S)-5,7-dihydroxy-2-(8-hydroxy-2,2-dimethylchromen-6-yl)-2,3-dihydrochromen-4-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C20H18O6/c1-20(2)4-3-10-5-11(6-15(24)19(10)26-20)16-9-14(23)18-13(22)7-12(21)8-17(18)25-16/h3-8,16,21-22,24H,9H2,1-2H3/t16-/m0/s1
InChI Key RFBNSYVWJNUVHE-INIZCTEOSA-N
Popularity 7 references in papers

Physical and Chemical Properties

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Molecular Formula C20H18O6
Molecular Weight 354.40 g/mol
Exact Mass 354.11033829 g/mol
Topological Polar Surface Area (TPSA) 96.20 Ų
XlogP 3.30
Atomic LogP (AlogP) 3.69
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 1

Synonyms

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101923-93-7
(2S)-5,7-dihydroxy-2-(8-hydroxy-2,2-dimethylchromen-6-yl)-2,3-dihydrochromen-4-one
RefChem:182817
5,7-dihydroxy-2-(8-hydroxy-2,2-dimethylchromen-6-yl)-2,3-dihydrochromen-4-one
CHEMBL229617
SCHEMBL30266754
BDBM50212396
XS161552
(2S)-5,7-dihydroxy-2-(8-hydroxy-2,2-dimethyl-chromen-6-yl)chroman-4-one

2D Structure

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2D Structure of Sigmoidin C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9545 95.45%
Caco-2 - 0.5591 55.91%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.7574 75.74%
OATP2B1 inhibitior - 0.5798 57.98%
OATP1B1 inhibitior + 0.9208 92.08%
OATP1B3 inhibitior + 0.9764 97.64%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.5360 53.60%
P-glycoprotein inhibitior - 0.6899 68.99%
P-glycoprotein substrate - 0.7093 70.93%
CYP3A4 substrate + 0.6304 63.04%
CYP2C9 substrate - 0.7981 79.81%
CYP2D6 substrate - 0.8063 80.63%
CYP3A4 inhibition + 0.7598 75.98%
CYP2C9 inhibition + 0.7183 71.83%
CYP2C19 inhibition + 0.6040 60.40%
CYP2D6 inhibition - 0.6838 68.38%
CYP1A2 inhibition - 0.5060 50.60%
CYP2C8 inhibition + 0.4638 46.38%
CYP inhibitory promiscuity + 0.6638 66.38%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5241 52.41%
Eye corrosion - 0.9907 99.07%
Eye irritation + 0.6222 62.22%
Skin irritation - 0.7310 73.10%
Skin corrosion - 0.9174 91.74%
Ames mutagenesis - 0.5000 50.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5286 52.86%
Micronuclear + 0.6759 67.59%
Hepatotoxicity + 0.5176 51.76%
skin sensitisation - 0.7729 77.29%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity + 0.6887 68.87%
Acute Oral Toxicity (c) III 0.6209 62.09%
Estrogen receptor binding + 0.7866 78.66%
Androgen receptor binding + 0.5589 55.89%
Thyroid receptor binding + 0.6004 60.04%
Glucocorticoid receptor binding + 0.7080 70.80%
Aromatase binding - 0.5669 56.69%
PPAR gamma + 0.8174 81.74%
Honey bee toxicity - 0.7883 78.83%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9076 90.76%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.24% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.73% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.65% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.75% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.29% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 91.82% 99.23%
CHEMBL4208 P20618 Proteasome component C5 91.46% 90.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.14% 95.56%
CHEMBL1929 P47989 Xanthine dehydrogenase 89.37% 96.12%
CHEMBL4040 P28482 MAP kinase ERK2 88.38% 83.82%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.72% 97.09%
CHEMBL2581 P07339 Cathepsin D 86.36% 98.95%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 85.12% 85.11%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.02% 100.00%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 83.96% 93.40%
CHEMBL2964 P36507 Dual specificity mitogen-activated protein kinase kinase 2 83.61% 80.00%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 81.73% 95.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Erythrina abyssinica
Erythrina abyssinica
Erythrina latissima
Erythrina sigmoidea

Cross-Links

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PubChem 44424648
NPASS NPC118256
LOTUS LTS0019587
wikiData Q104397946