Nimbidic acid

Details

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Internal ID 61d602f5-28e9-4853-889f-8ee805eb47ed
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids > Limonoids
IUPAC Name 2-[(1R,2S,4R,6R,9R,10R,11R,12S,14R,15R,18R)-6-(furan-3-yl)-12,14-dihydroxy-7,9,11,15-tetramethyl-3,17-dioxapentacyclo[9.6.1.02,9.04,8.015,18]octadec-7-en-10-yl]acetic acid
SMILES (Canonical) CC1=C2C(CC1C3=COC=C3)OC4C2(C(C5(C(CC(C6(C5C4OC6)C)O)O)C)CC(=O)O)C
SMILES (Isomeric) CC1=C2[C@@H](C[C@H]1C3=COC=C3)O[C@H]4[C@@]2([C@@H]([C@]5([C@H](C[C@H]([C@@]6([C@@H]5[C@H]4OC6)C)O)O)C)CC(=O)O)C
InChI InChI=1S/C26H34O7/c1-12-14(13-5-6-31-10-13)7-15-20(12)26(4)16(8-19(29)30)25(3)18(28)9-17(27)24(2)11-32-21(22(24)25)23(26)33-15/h5-6,10,14-18,21-23,27-28H,7-9,11H2,1-4H3,(H,29,30)/t14-,15-,16-,17-,18+,21-,22+,23-,24-,25+,26-/m1/s1
InChI Key QMEMRUDWBPMCGJ-SRSHEJQUSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C26H34O7
Molecular Weight 458.50 g/mol
Exact Mass 458.23045342 g/mol
Topological Polar Surface Area (TPSA) 109.00 Ų
XlogP 1.30
Atomic LogP (AlogP) 3.11
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

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Nimbidic acid
29803-85-8
DTXSID70952244
QMEMRUDWBPMCGJ-SRSHEJQUSA-N
[8-(Furan-3-yl)-3,5-dihydroxy-2a,5a,6a,7-tetramethyl-2a,4,5,5a,6,6a,8,9,9a,10a,10b,10c-dodecahydro-2H,3H-cyclopenta[d]naphtho[2,3-b:1,8-b'c']difuran-6-yl]acetic acid
2H,3H-Cyclopenta(d')naphtho(1,8-bc:2,3-b')difuran-6-acetic acid, 8-(3-furanyl)-2a,4,5,5a,6,6a,8,9,9a,10a,10b,10c-dodecahydro-3,5-dihydroxy-2a,5a,6a,7-tetramethyl-,(2aR,3R,5S,5aR,6R,6aR,8R,9aR,10aS,10bR,10cR)-

2D Structure

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2D Structure of Nimbidic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9882 98.82%
Caco-2 - 0.6850 68.50%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.7535 75.35%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7822 78.22%
OATP1B3 inhibitior + 0.9554 95.54%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.8749 87.49%
P-glycoprotein inhibitior - 0.5202 52.02%
P-glycoprotein substrate + 0.5893 58.93%
CYP3A4 substrate + 0.6673 66.73%
CYP2C9 substrate - 0.8155 81.55%
CYP2D6 substrate - 0.8230 82.30%
CYP3A4 inhibition - 0.7035 70.35%
CYP2C9 inhibition - 0.8696 86.96%
CYP2C19 inhibition - 0.8882 88.82%
CYP2D6 inhibition - 0.9433 94.33%
CYP1A2 inhibition - 0.9091 90.91%
CYP2C8 inhibition + 0.7193 71.93%
CYP inhibitory promiscuity - 0.7497 74.97%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Danger 0.4460 44.60%
Eye corrosion - 0.9918 99.18%
Eye irritation - 0.9453 94.53%
Skin irritation - 0.5189 51.89%
Skin corrosion - 0.9459 94.59%
Ames mutagenesis - 0.5464 54.64%
Human Ether-a-go-go-Related Gene inhibition + 0.7882 78.82%
Micronuclear - 0.6500 65.00%
Hepatotoxicity + 0.5646 56.46%
skin sensitisation - 0.8830 88.30%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.9778 97.78%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity - 0.7655 76.55%
Acute Oral Toxicity (c) I 0.6292 62.92%
Estrogen receptor binding + 0.7981 79.81%
Androgen receptor binding + 0.6926 69.26%
Thyroid receptor binding + 0.5826 58.26%
Glucocorticoid receptor binding + 0.8168 81.68%
Aromatase binding + 0.7784 77.84%
PPAR gamma + 0.6523 65.23%
Honey bee toxicity - 0.7820 78.20%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5200 52.00%
Fish aquatic toxicity + 0.9957 99.57%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.44% 96.09%
CHEMBL221 P23219 Cyclooxygenase-1 95.22% 90.17%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.37% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.16% 86.33%
CHEMBL2581 P07339 Cathepsin D 91.94% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.01% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 90.56% 85.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.71% 95.56%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 86.14% 81.11%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 85.88% 93.00%
CHEMBL5028 O14672 ADAM10 84.06% 97.50%
CHEMBL1293294 P51151 Ras-related protein Rab-9A 81.92% 87.67%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.81% 89.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 81.49% 95.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.33% 94.45%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.33% 96.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.46% 94.00%
CHEMBL3492 P49721 Proteasome Macropain subunit 80.18% 90.24%
CHEMBL3401 O75469 Pregnane X receptor 80.06% 94.73%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Azadirachta indica
Centaurea sinaica
Chisocheton ceramicus
Cleome spinosa
Daphniphyllum himalense subsp. angustifolium
Goniothalamus giganteus
Marcetella moquiniana
Melochia corchorifolia
Phalaenopsis schilleriana
Stachys palustris
Walsura trifoliolata

Cross-Links

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PubChem 185704
NPASS NPC12343