Rubrofusarin gentiobioside

Details

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Internal ID a5cec3d6-c89e-412a-be4b-b6ab93f2f9eb
Taxonomy Organoheterocyclic compounds > Naphthopyrans > Naphthopyranones > Naphthopyranone glycosides
IUPAC Name 5-hydroxy-8-methoxy-2-methyl-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxybenzo[g]chromen-4-one
SMILES (Canonical) CC1=CC(=O)C2=C(C3=C(C=C(C=C3C=C2O1)OC)OC4C(C(C(C(O4)COC5C(C(C(C(O5)CO)O)O)O)O)O)O)O
SMILES (Isomeric) CC1=CC(=O)C2=C(C3=C(C=C(C=C3C=C2O1)OC)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)O)O)O)O
InChI InChI=1S/C27H32O15/c1-9-3-12(29)18-13(39-9)5-10-4-11(37-2)6-14(17(10)21(18)32)40-27-25(36)23(34)20(31)16(42-27)8-38-26-24(35)22(33)19(30)15(7-28)41-26/h3-6,15-16,19-20,22-28,30-36H,7-8H2,1-2H3/t15-,16-,19-,20-,22+,23+,24-,25-,26-,27-/m1/s1
InChI Key JIBJMBHKGBDCPN-IJTBWITGSA-N
Popularity 7 references in papers

Physical and Chemical Properties

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Molecular Formula C27H32O15
Molecular Weight 596.50 g/mol
Exact Mass 596.17412031 g/mol
Topological Polar Surface Area (TPSA) 234.00 Ų
XlogP -1.00
Atomic LogP (AlogP) -2.03
H-Bond Acceptor 15
H-Bond Donor 8
Rotatable Bonds 7

Synonyms

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24577-90-0
Rubrofusarin-6-O-beta-gentiobioside
CHEMBL3634699
Rubrofusarin-6-O-beta-D-gentiobioside
5-hydroxy-8-methoxy-2-methyl-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxybenzo[g]chromen-4-one
DTXSID301310928
HY-N4177
BDBM50133113
AKOS037515346
MS-30580
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Rubrofusarin gentiobioside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6956 69.56%
Caco-2 - 0.8866 88.66%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.5635 56.35%
OATP2B1 inhibitior - 0.5839 58.39%
OATP1B1 inhibitior + 0.8303 83.03%
OATP1B3 inhibitior + 0.9723 97.23%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.6767 67.67%
P-glycoprotein inhibitior - 0.6303 63.03%
P-glycoprotein substrate - 0.6328 63.28%
CYP3A4 substrate + 0.6207 62.07%
CYP2C9 substrate - 0.8740 87.40%
CYP2D6 substrate - 0.8547 85.47%
CYP3A4 inhibition - 0.9364 93.64%
CYP2C9 inhibition - 0.9521 95.21%
CYP2C19 inhibition - 0.9234 92.34%
CYP2D6 inhibition - 0.9259 92.59%
CYP1A2 inhibition - 0.9313 93.13%
CYP2C8 inhibition - 0.5627 56.27%
CYP inhibitory promiscuity - 0.8225 82.25%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6598 65.98%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.9342 93.42%
Skin irritation - 0.8449 84.49%
Skin corrosion - 0.9681 96.81%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7002 70.02%
Micronuclear + 0.5733 57.33%
Hepatotoxicity - 0.8000 80.00%
skin sensitisation - 0.9231 92.31%
Respiratory toxicity - 0.5667 56.67%
Reproductive toxicity + 0.6556 65.56%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.7273 72.73%
Acute Oral Toxicity (c) III 0.7432 74.32%
Estrogen receptor binding + 0.8360 83.60%
Androgen receptor binding + 0.5406 54.06%
Thyroid receptor binding + 0.5389 53.89%
Glucocorticoid receptor binding + 0.5941 59.41%
Aromatase binding + 0.6805 68.05%
PPAR gamma + 0.7121 71.21%
Honey bee toxicity - 0.8033 80.33%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.7700 77.00%
Fish aquatic toxicity - 0.4096 40.96%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL2409 P34913 Epoxide hydratase 37500 nM
IC50
PMID: 26483136

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.21% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 96.69% 94.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.04% 85.14%
CHEMBL3401 O75469 Pregnane X receptor 95.49% 94.73%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 90.20% 86.92%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.57% 95.56%
CHEMBL2581 P07339 Cathepsin D 89.50% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.18% 86.33%
CHEMBL3714130 P46095 G-protein coupled receptor 6 88.99% 97.36%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.83% 99.17%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.30% 89.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 86.74% 99.15%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.53% 96.00%
CHEMBL4581 P52732 Kinesin-like protein 1 84.81% 93.18%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 83.31% 96.95%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 82.71% 99.23%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 82.24% 96.21%
CHEMBL3137262 O60341 LSD1/CoREST complex 80.46% 97.09%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Senna obtusifolia
Senna tora

Cross-Links

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PubChem 503733
NPASS NPC213052
ChEMBL CHEMBL3634699
LOTUS LTS0070124
wikiData Q105128891