Rubranoside A

Details

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Internal ID d61ae8e4-8d12-4fa3-9841-080244a52283
Taxonomy Phenylpropanoids and polyketides > Diarylheptanoids > Linear diarylheptanoids
IUPAC Name (2R,3R,4S,5S,6R)-2-[(3R)-1,7-bis(3,4-dihydroxyphenyl)heptan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) C1=CC(=C(C=C1CCCCC(CCC2=CC(=C(C=C2)O)O)OC3C(C(C(C(O3)CO)O)O)O)O)O
SMILES (Isomeric) C1=CC(=C(C=C1CCCC[C@H](CCC2=CC(=C(C=C2)O)O)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O
InChI InChI=1S/C25H34O10/c26-13-21-22(31)23(32)24(33)25(35-21)34-16(8-5-15-7-10-18(28)20(30)12-15)4-2-1-3-14-6-9-17(27)19(29)11-14/h6-7,9-12,16,21-33H,1-5,8,13H2/t16-,21-,22-,23+,24-,25-/m1/s1
InChI Key LSEDQFLRUJOXDX-SBOHWPTNSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C25H34O10
Molecular Weight 494.50 g/mol
Exact Mass 494.21519728 g/mol
Topological Polar Surface Area (TPSA) 180.00 Ų
XlogP 2.10
Atomic LogP (AlogP) 1.04
H-Bond Acceptor 10
H-Bond Donor 8
Rotatable Bonds 11

Synonyms

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211126-58-8
CHEMBL464362
(2R,3R,4S,5S,6R)-2-[(3R)-1,7-bis(3,4-dihydroxyphenyl)heptan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
MEGxp0_000212
ACon1_002274
CHEBI:183952
DTXSID401346958
BDBM50478448
NSC801066
AKOS040735358
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Rubranoside A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7718 77.18%
Caco-2 - 0.8569 85.69%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.8196 81.96%
OATP2B1 inhibitior - 0.8621 86.21%
OATP1B1 inhibitior + 0.9021 90.21%
OATP1B3 inhibitior + 0.9133 91.33%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.6360 63.60%
P-glycoprotein inhibitior - 0.4726 47.26%
P-glycoprotein substrate - 0.7895 78.95%
CYP3A4 substrate + 0.5834 58.34%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7997 79.97%
CYP3A4 inhibition - 0.8602 86.02%
CYP2C9 inhibition - 0.5918 59.18%
CYP2C19 inhibition - 0.6766 67.66%
CYP2D6 inhibition - 0.8876 88.76%
CYP1A2 inhibition - 0.8319 83.19%
CYP2C8 inhibition - 0.6312 63.12%
CYP inhibitory promiscuity - 0.7870 78.70%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.7240 72.40%
Eye corrosion - 0.9916 99.16%
Eye irritation - 0.9204 92.04%
Skin irritation - 0.8262 82.62%
Skin corrosion - 0.9635 96.35%
Ames mutagenesis + 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8801 88.01%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.8593 85.93%
skin sensitisation - 0.8302 83.02%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.5111 51.11%
Mitochondrial toxicity - 0.6875 68.75%
Nephrotoxicity - 0.8057 80.57%
Acute Oral Toxicity (c) III 0.6883 68.83%
Estrogen receptor binding + 0.8160 81.60%
Androgen receptor binding + 0.7035 70.35%
Thyroid receptor binding + 0.6016 60.16%
Glucocorticoid receptor binding - 0.6011 60.11%
Aromatase binding + 0.5713 57.13%
PPAR gamma + 0.7442 74.42%
Honey bee toxicity - 0.6834 68.34%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.8736 87.36%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.57% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 95.14% 91.49%
CHEMBL2581 P07339 Cathepsin D 92.40% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.36% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 92.16% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 91.06% 94.73%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 88.78% 86.92%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.16% 94.45%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 85.65% 95.89%
CHEMBL226 P30542 Adenosine A1 receptor 85.27% 95.93%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 84.91% 96.37%
CHEMBL3194 P02766 Transthyretin 83.97% 90.71%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.94% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.27% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.52% 86.33%
CHEMBL5939 Q9NZ08 Endoplasmic reticulum aminopeptidase 1 80.74% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Alnus firma
Alnus hirsuta
Alnus japonica
Alnus rubra
Pinus flexilis

Cross-Links

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PubChem 10097263
NPASS NPC264900
ChEMBL CHEMBL464362
LOTUS LTS0116803
wikiData Q105156479