Rhodiolin

Details

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Internal ID b1b9bf6d-2173-4380-9668-bf44b0df8f97
Taxonomy Lignans, neolignans and related compounds > Flavonolignans
IUPAC Name (2R,3R)-6,8-dihydroxy-3-(4-hydroxy-3-methoxyphenyl)-2-(hydroxymethyl)-9-(4-hydroxyphenyl)-2,3-dihydropyrano[3,2-h][1,4]benzodioxin-7-one
SMILES (Canonical) COC1=C(C=CC(=C1)C2C(OC3=C(O2)C=C(C4=C3OC(=C(C4=O)O)C5=CC=C(C=C5)O)O)CO)O
SMILES (Isomeric) COC1=C(C=CC(=C1)[C@@H]2[C@H](OC3=C(O2)C=C(C4=C3OC(=C(C4=O)O)C5=CC=C(C=C5)O)O)CO)O
InChI InChI=1S/C25H20O10/c1-32-16-8-12(4-7-14(16)28)22-18(10-26)34-24-17(33-22)9-15(29)19-20(30)21(31)23(35-25(19)24)11-2-5-13(27)6-3-11/h2-9,18,22,26-29,31H,10H2,1H3/t18-,22-/m1/s1
InChI Key POVCYOFRCMBMKD-XMSQKQJNSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C25H20O10
Molecular Weight 480.40 g/mol
Exact Mass 480.10564683 g/mol
Topological Polar Surface Area (TPSA) 155.00 Ų
XlogP 3.10
Atomic LogP (AlogP) 3.16
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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Rhodiolinin
86831-53-0
CHEMBL594871
(2R,3R)-6,8-dihydroxy-3-(4-hydroxy-3-methoxyphenyl)-2-(hydroxymethyl)-9-(4-hydroxyphenyl)-2,3-dihydropyrano[3,2-h][1,4]benzodioxin-7-one
D0I0WF
HY-N6841
BDBM50304348
MS-28932
CS-0100260
F82427
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Rhodiolin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9582 95.82%
Caco-2 - 0.8245 82.45%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.8254 82.54%
OATP2B1 inhibitior + 0.5773 57.73%
OATP1B1 inhibitior + 0.8518 85.18%
OATP1B3 inhibitior + 0.8959 89.59%
MATE1 inhibitior - 0.6200 62.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.8602 86.02%
P-glycoprotein inhibitior + 0.8519 85.19%
P-glycoprotein substrate - 0.6498 64.98%
CYP3A4 substrate + 0.6195 61.95%
CYP2C9 substrate - 0.6235 62.35%
CYP2D6 substrate - 0.8293 82.93%
CYP3A4 inhibition - 0.7232 72.32%
CYP2C9 inhibition + 0.7031 70.31%
CYP2C19 inhibition + 0.5804 58.04%
CYP2D6 inhibition - 0.9148 91.48%
CYP1A2 inhibition - 0.7201 72.01%
CYP2C8 inhibition + 0.8169 81.69%
CYP inhibitory promiscuity + 0.6975 69.75%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6621 66.21%
Eye corrosion - 0.9837 98.37%
Eye irritation - 0.6878 68.78%
Skin irritation - 0.7930 79.30%
Skin corrosion - 0.9707 97.07%
Ames mutagenesis + 0.5372 53.72%
Human Ether-a-go-go-Related Gene inhibition + 0.6908 69.08%
Micronuclear + 0.6759 67.59%
Hepatotoxicity - 0.5448 54.48%
skin sensitisation - 0.8971 89.71%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.6860 68.60%
Acute Oral Toxicity (c) III 0.7303 73.03%
Estrogen receptor binding + 0.8776 87.76%
Androgen receptor binding + 0.8233 82.33%
Thyroid receptor binding + 0.6399 63.99%
Glucocorticoid receptor binding + 0.8275 82.75%
Aromatase binding + 0.5396 53.96%
PPAR gamma + 0.7746 77.46%
Honey bee toxicity - 0.7450 74.50%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity - 0.4611 46.11%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.73% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.04% 85.14%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.34% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.39% 89.00%
CHEMBL2581 P07339 Cathepsin D 93.72% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.47% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.29% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.27% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.09% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.98% 97.09%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.98% 99.15%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.14% 99.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 87.78% 86.92%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.64% 99.23%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.79% 95.50%
CHEMBL3401 O75469 Pregnane X receptor 83.51% 94.73%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.41% 95.89%
CHEMBL3194 P02766 Transthyretin 83.19% 90.71%
CHEMBL3438 Q05513 Protein kinase C zeta 83.08% 88.48%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.39% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Juniperus communis
Rhodiola fastigiata
Rhodiola rosea

Cross-Links

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PubChem 14778358
NPASS NPC295082
ChEMBL CHEMBL594871
LOTUS LTS0218330
wikiData Q82862929