Rhamnocitrin 3-apiosyl-(1->2)-glucoside-4'-glucoside

Details

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Internal ID d94d6bdc-6096-4e1e-bd14-b128ef8459d8
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 3-[3-[3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5-hydroxy-7-methoxy-2-[4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]chromen-4-one
SMILES (Canonical) COC1=CC(=C2C(=C1)OC(=C(C2=O)OC3C(C(C(C(O3)CO)O)O)OC4C(C(CO4)(CO)O)O)C5=CC=C(C=C5)OC6C(C(C(C(O6)CO)O)O)O)O
SMILES (Isomeric) COC1=CC(=C2C(=C1)OC(=C(C2=O)OC3C(C(C(C(O3)CO)O)O)OC4C(C(CO4)(CO)O)O)C5=CC=C(C=C5)OC6C(C(C(C(O6)CO)O)O)O)O
InChI InChI=1S/C33H40O20/c1-46-14-6-15(37)19-16(7-14)49-26(12-2-4-13(5-3-12)48-30-25(43)23(41)20(38)17(8-34)50-30)27(22(19)40)52-31-28(24(42)21(39)18(9-35)51-31)53-32-29(44)33(45,10-36)11-47-32/h2-7,17-18,20-21,23-25,28-32,34-39,41-45H,8-11H2,1H3
InChI Key YCXFPUHHUJNTNY-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C33H40O20
Molecular Weight 756.70 g/mol
Exact Mass 756.21129366 g/mol
Topological Polar Surface Area (TPSA) 313.00 Ų
XlogP -2.00
Atomic LogP (AlogP) -4.00
H-Bond Acceptor 20
H-Bond Donor 11
Rotatable Bonds 11

Synonyms

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3-o-beta-D-apiofuranosyl(1-2)-beta-D-glucopyranosylrhamnocitrin4'-o-beta-D-glucopyranoside
LMPK12112567

2D Structure

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2D Structure of Rhamnocitrin 3-apiosyl-(1->2)-glucoside-4'-glucoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6754 67.54%
Caco-2 - 0.9032 90.32%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6254 62.54%
OATP2B1 inhibitior - 0.7187 71.87%
OATP1B1 inhibitior + 0.9166 91.66%
OATP1B3 inhibitior + 0.9655 96.55%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.8603 86.03%
P-glycoprotein inhibitior + 0.6469 64.69%
P-glycoprotein substrate + 0.5097 50.97%
CYP3A4 substrate + 0.6932 69.32%
CYP2C9 substrate - 0.8407 84.07%
CYP2D6 substrate - 0.8539 85.39%
CYP3A4 inhibition - 0.8418 84.18%
CYP2C9 inhibition - 0.8860 88.60%
CYP2C19 inhibition - 0.8296 82.96%
CYP2D6 inhibition - 0.9113 91.13%
CYP1A2 inhibition - 0.9060 90.60%
CYP2C8 inhibition + 0.7452 74.52%
CYP inhibitory promiscuity - 0.7811 78.11%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5250 52.50%
Eye corrosion - 0.9912 99.12%
Eye irritation - 0.9099 90.99%
Skin irritation - 0.8131 81.31%
Skin corrosion - 0.9457 94.57%
Ames mutagenesis + 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8175 81.75%
Micronuclear + 0.6733 67.33%
Hepatotoxicity - 0.6625 66.25%
skin sensitisation - 0.8821 88.21%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity - 0.8035 80.35%
Acute Oral Toxicity (c) III 0.6985 69.85%
Estrogen receptor binding + 0.8056 80.56%
Androgen receptor binding + 0.6770 67.70%
Thyroid receptor binding - 0.4897 48.97%
Glucocorticoid receptor binding - 0.5146 51.46%
Aromatase binding + 0.5896 58.96%
PPAR gamma + 0.7337 73.37%
Honey bee toxicity - 0.7258 72.58%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.6644 66.44%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.65% 91.11%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 97.77% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.72% 89.00%
CHEMBL2581 P07339 Cathepsin D 95.70% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.05% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.69% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.66% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.06% 85.14%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 92.20% 99.15%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.34% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.39% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 88.37% 95.93%
CHEMBL4208 P20618 Proteasome component C5 86.86% 90.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.77% 95.89%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 86.36% 94.33%
CHEMBL3714130 P46095 G-protein coupled receptor 6 86.09% 97.36%
CHEMBL3401 O75469 Pregnane X receptor 85.23% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.81% 99.23%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.81% 92.94%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.63% 86.92%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 84.36% 95.83%
CHEMBL220 P22303 Acetylcholinesterase 84.23% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.87% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 83.20% 96.00%
CHEMBL3922 P50579 Methionine aminopeptidase 2 82.96% 97.28%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 81.63% 95.71%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.48% 97.14%
CHEMBL4940 P07195 L-lactate dehydrogenase B chain 80.34% 95.53%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Phyllolobium chinense

Cross-Links

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PubChem 44259549
LOTUS LTS0224584
wikiData Q105346562