Pubesenolide

Details

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Internal ID 643cf59c-524a-4f7a-89de-cb210e312754
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives
IUPAC Name 2-[1-(1,3-dihydroxy-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl)ethyl]-5-(hydroxymethyl)-4-methyl-2,3-dihydropyran-6-one
SMILES (Canonical) CC1=C(C(=O)OC(C1)C(C)C2CCC3C2(CCC4C3CC=C5C4(C(CC(C5)O)O)C)C)CO
SMILES (Isomeric) CC1=C(C(=O)OC(C1)C(C)C2CCC3C2(CCC4C3CC=C5C4(C(CC(C5)O)O)C)C)CO
InChI InChI=1S/C28H42O5/c1-15-11-24(33-26(32)20(15)14-29)16(2)21-7-8-22-19-6-5-17-12-18(30)13-25(31)28(17,4)23(19)9-10-27(21,22)3/h5,16,18-19,21-25,29-31H,6-14H2,1-4H3
InChI Key FYYIHVSEGVWNCF-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C28H42O5
Molecular Weight 458.60 g/mol
Exact Mass 458.30322444 g/mol
Topological Polar Surface Area (TPSA) 87.00 Ų
XlogP 4.70
Atomic LogP (AlogP) 4.16
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

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2-[1-(1,3-dihydroxy-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl)ethyl]-5-(hydroxymethyl)-4-methyl-2,3-dihydropyran-6-one
CHEBI:168182

2D Structure

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2D Structure of Pubesenolide

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9445 94.45%
Caco-2 - 0.6090 60.90%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability + 0.6143 61.43%
Subcellular localzation Mitochondria 0.6868 68.68%
OATP2B1 inhibitior - 0.5687 56.87%
OATP1B1 inhibitior + 0.8649 86.49%
OATP1B3 inhibitior + 0.9382 93.82%
MATE1 inhibitior - 0.8212 82.12%
OCT2 inhibitior - 0.5359 53.59%
BSEP inhibitior + 0.9073 90.73%
P-glycoprotein inhibitior - 0.4812 48.12%
P-glycoprotein substrate + 0.6275 62.75%
CYP3A4 substrate + 0.7495 74.95%
CYP2C9 substrate - 0.8086 80.86%
CYP2D6 substrate - 0.8794 87.94%
CYP3A4 inhibition - 0.7295 72.95%
CYP2C9 inhibition - 0.9453 94.53%
CYP2C19 inhibition - 0.9481 94.81%
CYP2D6 inhibition - 0.9437 94.37%
CYP1A2 inhibition - 0.7705 77.05%
CYP2C8 inhibition + 0.4799 47.99%
CYP inhibitory promiscuity - 0.8863 88.63%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6057 60.57%
Eye corrosion - 0.9920 99.20%
Eye irritation - 0.9668 96.68%
Skin irritation + 0.6567 65.67%
Skin corrosion - 0.9437 94.37%
Ames mutagenesis - 0.7114 71.14%
Human Ether-a-go-go-Related Gene inhibition + 0.6627 66.27%
Micronuclear - 0.8600 86.00%
Hepatotoxicity + 0.5780 57.80%
skin sensitisation - 0.8981 89.81%
Respiratory toxicity + 0.8889 88.89%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.8250 82.50%
Nephrotoxicity - 0.6036 60.36%
Acute Oral Toxicity (c) III 0.6884 68.84%
Estrogen receptor binding + 0.7499 74.99%
Androgen receptor binding + 0.7937 79.37%
Thyroid receptor binding + 0.5710 57.10%
Glucocorticoid receptor binding + 0.8005 80.05%
Aromatase binding + 0.6478 64.78%
PPAR gamma + 0.6220 62.20%
Honey bee toxicity - 0.7674 76.74%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9448 94.48%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 93.66% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.38% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.24% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.33% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.01% 100.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 90.50% 95.89%
CHEMBL5103 Q969S8 Histone deacetylase 10 89.81% 90.08%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 89.31% 91.11%
CHEMBL1871 P10275 Androgen Receptor 88.90% 96.43%
CHEMBL226 P30542 Adenosine A1 receptor 87.43% 95.93%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.85% 86.33%
CHEMBL3192 Q9BY41 Histone deacetylase 8 86.73% 93.99%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 86.27% 93.04%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.29% 89.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.78% 97.25%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 84.74% 90.71%
CHEMBL1937 Q92769 Histone deacetylase 2 84.67% 94.75%
CHEMBL3359 P21462 Formyl peptide receptor 1 84.38% 93.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.88% 99.23%
CHEMBL2996 Q05655 Protein kinase C delta 83.17% 97.79%
CHEMBL5028 O14672 ADAM10 82.60% 97.50%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 81.95% 98.46%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.65% 97.14%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.49% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Physalis pubescens
Withania somnifera

Cross-Links

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PubChem 72999858
LOTUS LTS0223665
wikiData Q105004809