Prodelphinidin C2

Details

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Internal ID 02c92757-4c87-4161-9560-b820d803c16b
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Biflavonoids and polyflavonoids
IUPAC Name (2R,3S,4R)-4-[(2R,3S)-2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxy-3,4-dihydro-2H-chromen-8-yl]-2-(3,4,5-trihydroxyphenyl)-8-[(2R,3S,4S)-3,5,7-trihydroxy-2-(3,4,5-trihydroxyphenyl)-3,4-dihydro-2H-chromen-4-yl]-3,4-dihydro-2H-chromene-3,5,7-triol
SMILES (Canonical) C1C(C(OC2=C1C(=CC(=C2C3C(C(OC4=C(C(=CC(=C34)O)O)C5C(C(OC6=CC(=CC(=C56)O)O)C7=CC(=C(C(=C7)O)O)O)O)C8=CC(=C(C(=C8)O)O)O)O)O)O)C9=CC(=C(C=C9)O)O)O
SMILES (Isomeric) C1[C@@H]([C@H](OC2=C1C(=CC(=C2[C@H]3[C@@H]([C@H](OC4=C(C(=CC(=C34)O)O)[C@H]5[C@@H]([C@H](OC6=CC(=CC(=C56)O)O)C7=CC(=C(C(=C7)O)O)O)O)C8=CC(=C(C(=C8)O)O)O)O)O)O)C9=CC(=C(C=C9)O)O)O
InChI InChI=1S/C45H38O20/c46-16-8-21(50)31-30(9-16)63-42(14-4-25(54)37(59)26(55)5-14)39(61)35(31)33-23(52)12-24(53)34-36(40(62)43(65-45(33)34)15-6-27(56)38(60)28(57)7-15)32-22(51)11-19(48)17-10-29(58)41(64-44(17)32)13-1-2-18(47)20(49)3-13/h1-9,11-12,29,35-36,39-43,46-62H,10H2/t29-,35-,36+,39-,40-,41+,42+,43+/m0/s1
InChI Key RJFFPCHJOFXZQD-YTSXHMEESA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C45H38O20
Molecular Weight 898.80 g/mol
Exact Mass 898.19564360 g/mol
Topological Polar Surface Area (TPSA) 372.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 3.86
H-Bond Acceptor 20
H-Bond Donor 17
Rotatable Bonds 5

Synonyms

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Prodelphinidin trimer GC-C-C
DTXSID30904148
Q63399283
79136-97-3

2D Structure

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2D Structure of Prodelphinidin C2

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8698 86.98%
Caco-2 - 0.8977 89.77%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7429 74.29%
Subcellular localzation Mitochondria 0.4793 47.93%
OATP2B1 inhibitior - 0.7087 70.87%
OATP1B1 inhibitior + 0.9491 94.91%
OATP1B3 inhibitior + 0.9459 94.59%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.7947 79.47%
P-glycoprotein inhibitior + 0.6835 68.35%
P-glycoprotein substrate - 0.7309 73.09%
CYP3A4 substrate + 0.6042 60.42%
CYP2C9 substrate - 0.5994 59.94%
CYP2D6 substrate + 0.5264 52.64%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9026 90.26%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9155 91.55%
CYP2C8 inhibition + 0.7566 75.66%
CYP inhibitory promiscuity - 0.8625 86.25%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6139 61.39%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.8846 88.46%
Skin irritation - 0.6044 60.44%
Skin corrosion - 0.9317 93.17%
Ames mutagenesis + 0.6900 69.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8764 87.64%
Micronuclear + 0.7859 78.59%
Hepatotoxicity - 0.7250 72.50%
skin sensitisation - 0.7665 76.65%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8000 80.00%
Mitochondrial toxicity + 0.6000 60.00%
Nephrotoxicity - 0.7462 74.62%
Acute Oral Toxicity (c) IV 0.5696 56.96%
Estrogen receptor binding + 0.7659 76.59%
Androgen receptor binding + 0.7577 75.77%
Thyroid receptor binding + 0.6022 60.22%
Glucocorticoid receptor binding - 0.4798 47.98%
Aromatase binding - 0.4860 48.60%
PPAR gamma + 0.7310 73.10%
Honey bee toxicity - 0.7892 78.92%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.6855 68.55%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.82% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 96.94% 91.49%
CHEMBL4040 P28482 MAP kinase ERK2 96.65% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.75% 96.09%
CHEMBL1929 P47989 Xanthine dehydrogenase 93.21% 96.12%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.94% 97.09%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 91.83% 99.15%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.61% 89.00%
CHEMBL3194 P02766 Transthyretin 89.17% 90.71%
CHEMBL3401 O75469 Pregnane X receptor 86.14% 94.73%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.85% 95.56%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 84.81% 96.37%
CHEMBL4208 P20618 Proteasome component C5 84.61% 90.00%
CHEMBL236 P41143 Delta opioid receptor 84.35% 99.35%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.72% 94.45%
CHEMBL2535 P11166 Glucose transporter 82.67% 98.75%
CHEMBL233 P35372 Mu opioid receptor 81.56% 97.93%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.44% 95.89%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 80.70% 85.11%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Bromelia karatas
Capnoides sempervirens
Chamaecrista kleinii
Cistus × incanus
Cornus kousa
Eucalyptus ovata
Helianthus maximiliani
Raulinoreitzia crenulata
Vateria indica

Cross-Links

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PubChem 71623698
NPASS NPC221289
LOTUS LTS0029343
wikiData Q63399283