Primulic acid 2

Details

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Internal ID 377e833b-8c7e-4f59-b95f-c563217728c2
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name 4-[4,5-dihydroxy-6-(hydroxymethyl)-3-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxyoxan-2-yl]oxy-5-[3,4-dihydroxy-6-(hydroxymethyl)-5-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl]oxy-3-hydroxy-6-[(2-hydroxy-4,5,9,9,13,20,20-heptamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracosan-10-yl)oxy]oxane-2-carboxylic acid
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(C(OC(C3OC4C(C(C(C(O4)CO)OC5C(C(C(CO5)O)O)O)O)O)OC6CCC7(C(C6(C)C)CCC8(C7CCC91C8(CC(C2(C9CC(CC2)(C)C)CO1)O)C)C)C)C(=O)O)O)CO)O)O)O)O)O
SMILES (Isomeric) CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(C(OC(C3OC4C(C(C(C(O4)CO)OC5C(C(C(CO5)O)O)O)O)O)OC6CCC7(C(C6(C)C)CCC8(C7CCC91C8(CC(C2(C9CC(CC2)(C)C)CO1)O)C)C)C)C(=O)O)O)CO)O)O)O)O)O
InChI InChI=1S/C59H96O27/c1-23-32(64)35(67)39(71)49(78-23)85-45-36(68)34(66)25(19-60)79-51(45)83-43-41(73)44(47(74)75)84-52(46(43)86-50-40(72)37(69)42(26(20-61)80-50)82-48-38(70)33(65)24(62)21-76-48)81-31-11-12-55(6)27(54(31,4)5)9-13-56(7)28(55)10-14-59-29-17-53(2,3)15-16-58(29,22-77-59)30(63)18-57(56,59)8/h23-46,48-52,60-73H,9-22H2,1-8H3,(H,74,75)
InChI Key PDCAFVYIKFVFFL-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C59H96O27
Molecular Weight 1237.40 g/mol
Exact Mass 1236.61389778 g/mol
Topological Polar Surface Area (TPSA) 422.00 Ų
XlogP -1.00
Atomic LogP (AlogP) -2.77
H-Bond Acceptor 26
H-Bond Donor 15
Rotatable Bonds 13

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Primulic acid 2

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6397 63.97%
Caco-2 - 0.8809 88.09%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.7227 72.27%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7693 76.93%
OATP1B3 inhibitior + 0.9276 92.76%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.8789 87.89%
P-glycoprotein inhibitior + 0.7461 74.61%
P-glycoprotein substrate + 0.5529 55.29%
CYP3A4 substrate + 0.7426 74.26%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8745 87.45%
CYP3A4 inhibition - 0.9228 92.28%
CYP2C9 inhibition - 0.8526 85.26%
CYP2C19 inhibition - 0.8627 86.27%
CYP2D6 inhibition - 0.9523 95.23%
CYP1A2 inhibition - 0.9157 91.57%
CYP2C8 inhibition + 0.7439 74.39%
CYP inhibitory promiscuity - 0.9693 96.93%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6545 65.45%
Eye corrosion - 0.9907 99.07%
Eye irritation - 0.9001 90.01%
Skin irritation - 0.6766 67.66%
Skin corrosion - 0.9455 94.55%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8157 81.57%
Micronuclear - 0.9000 90.00%
Hepatotoxicity - 0.8500 85.00%
skin sensitisation - 0.9229 92.29%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.9642 96.42%
Acute Oral Toxicity (c) I 0.6300 63.00%
Estrogen receptor binding + 0.7970 79.70%
Androgen receptor binding + 0.7519 75.19%
Thyroid receptor binding + 0.5307 53.07%
Glucocorticoid receptor binding + 0.7381 73.81%
Aromatase binding + 0.6458 64.58%
PPAR gamma + 0.8078 80.78%
Honey bee toxicity - 0.5942 59.42%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5355 53.55%
Fish aquatic toxicity + 0.8764 87.64%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.78% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.50% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 91.81% 95.93%
CHEMBL233 P35372 Mu opioid receptor 91.49% 97.93%
CHEMBL2581 P07339 Cathepsin D 90.67% 98.95%
CHEMBL3714130 P46095 G-protein coupled receptor 6 89.57% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.91% 86.33%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.71% 95.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.12% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.01% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.47% 89.00%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 86.43% 96.38%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 86.13% 91.24%
CHEMBL218 P21554 Cannabinoid CB1 receptor 85.92% 96.61%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.94% 100.00%
CHEMBL2243 O00519 Anandamide amidohydrolase 84.17% 97.53%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 83.86% 97.86%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.81% 100.00%
CHEMBL5255 O00206 Toll-like receptor 4 83.51% 92.50%
CHEMBL4302 P08183 P-glycoprotein 1 83.03% 92.98%
CHEMBL325 Q13547 Histone deacetylase 1 82.94% 95.92%
CHEMBL1937 Q92769 Histone deacetylase 2 82.03% 94.75%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.71% 94.33%
CHEMBL237 P41145 Kappa opioid receptor 81.66% 98.10%
CHEMBL2096618 P11274 Bcr/Abl fusion protein 81.47% 85.83%
CHEMBL5028 O14672 ADAM10 81.45% 97.50%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 81.23% 93.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.68% 95.89%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.53% 100.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.01% 91.07%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Primula veris

Cross-Links

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PubChem 74095087
LOTUS LTS0146335
wikiData Q105206304