Polyphyllin E (RG)

Details

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Internal ID 0944d9c4-35cc-48b9-a445-98f7a4fa0014
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name 2-methyl-6-[2-methyl-6-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl)oxy-5-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4-(3,4,5-trihydroxy-6-methyloxan-2-yl)oxyoxan-3-yl]oxyoxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)C)OC8C(C(C(C(O8)C)O)O)O)OC9C(C(C(C(O9)C)O)O)O)OC2C(C(C(C(O2)CO)O)O)O)C)C)C)OC1
SMILES (Isomeric) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)C)OC8C(C(C(C(O8)C)O)O)O)OC9C(C(C(C(O9)C)O)O)O)OC2C(C(C(C(O2)CO)O)O)O)C)C)C)OC1
InChI InChI=1S/C51H82O20/c1-20-10-15-51(62-19-20)21(2)32-30(71-51)17-29-27-9-8-25-16-26(11-13-49(25,6)28(27)12-14-50(29,32)7)66-48-44(70-47-41(61)38(58)35(55)31(18-52)67-47)43(69-46-40(60)37(57)34(54)23(4)64-46)42(24(5)65-48)68-45-39(59)36(56)33(53)22(3)63-45/h8,20-24,26-48,52-61H,9-19H2,1-7H3
InChI Key PLDYAXVZGBUCAG-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C51H82O20
Molecular Weight 1015.20 g/mol
Exact Mass 1014.53994500 g/mol
Topological Polar Surface Area (TPSA) 295.00 Ų
XlogP 0.80
Atomic LogP (AlogP) 0.09
H-Bond Acceptor 20
H-Bond Donor 10
Rotatable Bonds 9

Synonyms

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76296-74-7
AKOS040762213

2D Structure

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2D Structure of Polyphyllin E (RG)

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7196 71.96%
Caco-2 - 0.8850 88.50%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.7739 77.39%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8923 89.23%
OATP1B3 inhibitior + 0.8663 86.63%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.9566 95.66%
P-glycoprotein inhibitior + 0.7398 73.98%
P-glycoprotein substrate + 0.5124 51.24%
CYP3A4 substrate + 0.7439 74.39%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8216 82.16%
CYP3A4 inhibition - 0.9460 94.60%
CYP2C9 inhibition - 0.9118 91.18%
CYP2C19 inhibition - 0.9113 91.13%
CYP2D6 inhibition - 0.9360 93.60%
CYP1A2 inhibition - 0.8848 88.48%
CYP2C8 inhibition + 0.7395 73.95%
CYP inhibitory promiscuity - 0.8774 87.74%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5291 52.91%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.9090 90.90%
Skin irritation - 0.5662 56.62%
Skin corrosion - 0.9438 94.38%
Ames mutagenesis - 0.9800 98.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8186 81.86%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.9875 98.75%
skin sensitisation - 0.9240 92.40%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity - 0.5375 53.75%
Nephrotoxicity - 0.7756 77.56%
Acute Oral Toxicity (c) III 0.4459 44.59%
Estrogen receptor binding + 0.8515 85.15%
Androgen receptor binding + 0.7195 71.95%
Thyroid receptor binding - 0.5266 52.66%
Glucocorticoid receptor binding + 0.6571 65.71%
Aromatase binding + 0.6677 66.77%
PPAR gamma + 0.7661 76.61%
Honey bee toxicity - 0.5790 57.90%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.9442 94.42%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.73% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.56% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 96.56% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.78% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.82% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.44% 89.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 89.31% 95.89%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.88% 95.89%
CHEMBL1914 P06276 Butyrylcholinesterase 87.57% 95.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.41% 86.33%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.67% 97.25%
CHEMBL5255 O00206 Toll-like receptor 4 86.52% 92.50%
CHEMBL237 P41145 Kappa opioid receptor 86.46% 98.10%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 85.63% 89.05%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.49% 95.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.05% 94.45%
CHEMBL218 P21554 Cannabinoid CB1 receptor 84.69% 96.61%
CHEMBL3359 P21462 Formyl peptide receptor 1 83.00% 93.56%
CHEMBL2581 P07339 Cathepsin D 82.43% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.98% 94.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.56% 100.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.17% 86.92%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Paris polyphylla

Cross-Links

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PubChem 78144041
LOTUS LTS0236395
wikiData Q105210839