Picrocrocin

Details

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Internal ID 836dc4a1-300b-43cd-bff6-d9e71b58a3e3
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name (4R)-2,6,6-trimethyl-4-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxycyclohexene-1-carbaldehyde
SMILES (Canonical) CC1=C(C(CC(C1)OC2C(C(C(C(O2)CO)O)O)O)(C)C)C=O
SMILES (Isomeric) CC1=C(C(C[C@@H](C1)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)(C)C)C=O
InChI InChI=1S/C16H26O7/c1-8-4-9(5-16(2,3)10(8)6-17)22-15-14(21)13(20)12(19)11(7-18)23-15/h6,9,11-15,18-21H,4-5,7H2,1-3H3/t9-,11-,12-,13+,14-,15-/m1/s1
InChI Key WMHJCSAICLADIN-WYWSWGBSSA-N
Popularity 82 references in papers

Physical and Chemical Properties

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Molecular Formula C16H26O7
Molecular Weight 330.37 g/mol
Exact Mass 330.16785316 g/mol
Topological Polar Surface Area (TPSA) 116.00 Ų
XlogP -0.50
Atomic LogP (AlogP) -0.49
H-Bond Acceptor 7
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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138-55-6
Picrocrocine
saffron-bitter
Saffronbitter
Safranbitter
UNII-ON5B022511
(R)-4-(beta-D-Glucopyranosyloxy)-2,6,6-trimethyl-1-cyclohexene-1-carboxaldehyde
ON5B022511
(R)-2,6,6-trimethyl-4-(((2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)cyclohex-1-ene-1-carbaldehyde
(1R)-4-formyl-3,5,5-trimethylcyclohex-3-en-1-yl beta-D-glucopyranoside
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Picrocrocin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4890 48.90%
Caco-2 - 0.6348 63.48%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.8857 88.57%
Subcellular localzation Mitochondria 0.8587 85.87%
OATP2B1 inhibitior - 0.8572 85.72%
OATP1B1 inhibitior + 0.8027 80.27%
OATP1B3 inhibitior + 0.8614 86.14%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.6833 68.33%
P-glycoprotein inhibitior - 0.8802 88.02%
P-glycoprotein substrate - 0.9063 90.63%
CYP3A4 substrate + 0.5900 59.00%
CYP2C9 substrate - 0.8056 80.56%
CYP2D6 substrate - 0.8652 86.52%
CYP3A4 inhibition - 0.9357 93.57%
CYP2C9 inhibition - 0.7499 74.99%
CYP2C19 inhibition - 0.7975 79.75%
CYP2D6 inhibition - 0.9346 93.46%
CYP1A2 inhibition - 0.8302 83.02%
CYP2C8 inhibition - 0.8353 83.53%
CYP inhibitory promiscuity - 0.8167 81.67%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6788 67.88%
Eye corrosion - 0.9906 99.06%
Eye irritation - 0.9662 96.62%
Skin irritation - 0.8017 80.17%
Skin corrosion - 0.9643 96.43%
Ames mutagenesis - 0.6437 64.37%
Human Ether-a-go-go-Related Gene inhibition - 0.5530 55.30%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.7155 71.55%
skin sensitisation - 0.7948 79.48%
Respiratory toxicity - 0.5222 52.22%
Reproductive toxicity + 0.6778 67.78%
Mitochondrial toxicity - 0.6000 60.00%
Nephrotoxicity + 0.6923 69.23%
Acute Oral Toxicity (c) III 0.6810 68.10%
Estrogen receptor binding - 0.7355 73.55%
Androgen receptor binding - 0.6594 65.94%
Thyroid receptor binding + 0.6568 65.68%
Glucocorticoid receptor binding + 0.5709 57.09%
Aromatase binding + 0.5609 56.09%
PPAR gamma - 0.5506 55.06%
Honey bee toxicity - 0.7777 77.77%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.8977 89.77%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.33% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.72% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.65% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.89% 97.09%
CHEMBL1951 P21397 Monoamine oxidase A 87.74% 91.49%
CHEMBL2581 P07339 Cathepsin D 82.06% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.84% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 81.71% 94.73%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.94% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 80.58% 96.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.12% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Crocus sativus

Cross-Links

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PubChem 130796
NPASS NPC295362
LOTUS LTS0074384
wikiData Q289866