Physcion-beta-D-gentiobioside

Details

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Internal ID 6dd5103a-72cd-40f2-93c5-424d78487062
Taxonomy Benzenoids > Anthracenes > Anthraquinones
IUPAC Name 1-hydroxy-3-methoxy-6-methyl-8-[3,4,5-trihydroxy-6-[[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxyanthracene-9,10-dione
SMILES (Canonical) CC1=CC2=C(C(=C1)OC3C(C(C(C(O3)COC4C(C(C(C(O4)CO)O)O)O)O)O)O)C(=O)C5=C(C2=O)C=C(C=C5O)OC
SMILES (Isomeric) CC1=CC2=C(C(=C1)OC3C(C(C(C(O3)COC4C(C(C(C(O4)CO)O)O)O)O)O)O)C(=O)C5=C(C2=O)C=C(C=C5O)OC
InChI InChI=1S/C28H32O15/c1-9-3-11-18(22(34)17-12(19(11)31)5-10(39-2)6-13(17)30)14(4-9)41-28-26(38)24(36)21(33)16(43-28)8-40-27-25(37)23(35)20(32)15(7-29)42-27/h3-6,15-16,20-21,23-30,32-33,35-38H,7-8H2,1-2H3
InChI Key LHWONDXFTUKXDH-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C28H32O15
Molecular Weight 608.50 g/mol
Exact Mass 608.17412031 g/mol
Topological Polar Surface Area (TPSA) 242.00 Ų
XlogP -0.90
Atomic LogP (AlogP) -2.51
H-Bond Acceptor 15
H-Bond Donor 8
Rotatable Bonds 7

Synonyms

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Physcion-beta -D-glucoside
Physcion-beta -D-gentiobioside

2D Structure

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2D Structure of Physcion-beta-D-gentiobioside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7316 73.16%
Caco-2 - 0.8939 89.39%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.4633 46.33%
OATP2B1 inhibitior - 0.8536 85.36%
OATP1B1 inhibitior + 0.8765 87.65%
OATP1B3 inhibitior + 0.9776 97.76%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.5124 51.24%
P-glycoprotein inhibitior - 0.5633 56.33%
P-glycoprotein substrate - 0.8153 81.53%
CYP3A4 substrate + 0.6130 61.30%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8495 84.95%
CYP3A4 inhibition - 0.9311 93.11%
CYP2C9 inhibition - 0.9167 91.67%
CYP2C19 inhibition - 0.9109 91.09%
CYP2D6 inhibition - 0.9519 95.19%
CYP1A2 inhibition - 0.9167 91.67%
CYP2C8 inhibition + 0.4553 45.53%
CYP inhibitory promiscuity - 0.8842 88.42%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7120 71.20%
Eye corrosion - 0.9898 98.98%
Eye irritation - 0.9252 92.52%
Skin irritation - 0.8593 85.93%
Skin corrosion - 0.9592 95.92%
Ames mutagenesis + 0.6408 64.08%
Human Ether-a-go-go-Related Gene inhibition - 0.4375 43.75%
Micronuclear + 0.5933 59.33%
Hepatotoxicity - 0.6823 68.23%
skin sensitisation - 0.9107 91.07%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity + 0.7688 76.88%
Acute Oral Toxicity (c) III 0.6709 67.09%
Estrogen receptor binding + 0.8326 83.26%
Androgen receptor binding - 0.5761 57.61%
Thyroid receptor binding - 0.5361 53.61%
Glucocorticoid receptor binding + 0.5613 56.13%
Aromatase binding + 0.6227 62.27%
PPAR gamma + 0.7230 72.30%
Honey bee toxicity - 0.7852 78.52%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.7000 70.00%
Fish aquatic toxicity + 0.7401 74.01%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.26% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.53% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.63% 95.56%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 94.99% 96.21%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.49% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.74% 85.14%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.53% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.45% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 93.37% 94.73%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 92.06% 99.15%
CHEMBL226 P30542 Adenosine A1 receptor 90.75% 95.93%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.36% 99.23%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 88.31% 86.92%
CHEMBL3714130 P46095 G-protein coupled receptor 6 87.71% 97.36%
CHEMBL3060 Q9Y345 Glycine transporter 2 87.61% 99.17%
CHEMBL4208 P20618 Proteasome component C5 86.71% 90.00%
CHEMBL4581 P52732 Kinesin-like protein 1 85.67% 93.18%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.26% 96.00%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 82.16% 96.95%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.93% 95.89%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.36% 96.90%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rheum australe

Cross-Links

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PubChem 73981703
LOTUS LTS0204476
wikiData Q105152024