Pesudoginsenoside Rp1 Methyl Ester

Details

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Internal ID 73b9498d-d5a5-4e75-a562-479c31775f02
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (4aS,6aR,6aS,6bR,8aR,10S,12aR,14bS)-10-[(2R,3R,4S,5S,6S)-4,5-dihydroxy-6-methoxycarbonyl-3-[(2R,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C42H66O13/c1-37(2)15-17-42(36(49)50)18-16-40(6)21(22(42)19-37)9-10-25-39(5)13-12-26(38(3,4)24(39)11-14-41(25,40)7)53-35-32(29(46)28(45)31(54-35)33(48)51-8)55-34-30(47)27(44)23(43)20-52-34/h9,22-32,34-35,43-47H,10-20H2,1-8H3,(H,49,50)/t22-,23+,24-,25+,26-,27-,28-,29-,30+,31-,32+,34+,35+,39-,40+,41+,42-/m0/s1
InChI Key FUUKVKKUBFPWND-CIVMPPKVSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C42H66O13
Molecular Weight 779.00 g/mol
Exact Mass 778.45034216 g/mol
Topological Polar Surface Area (TPSA) 202.00 Ų
XlogP 4.90
Atomic LogP (AlogP) 3.70
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 6

Synonyms

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(4aS,6aR,6aS,6bR,8aR,10S,12aR,14bS)-10-((2R,3R,4S,5S,6S)-4,5-dihydroxy-6-methoxycarbonyl-3-((2R,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl)oxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid
(4aS,6aR,6aS,6bR,8aR,10S,12aR,14bS)-10-[(2R,3R,4S,5S,6S)-4,5-dihydroxy-6-methoxycarbonyl-3-[(2R,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid
RefChem:172098
CHEMBL1288831

2D Structure

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2D Structure of Pesudoginsenoside Rp1 Methyl Ester

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8713 87.13%
Caco-2 - 0.8840 88.40%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.8460 84.60%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.6974 69.74%
OATP1B3 inhibitior + 0.8647 86.47%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior + 0.6384 63.84%
P-glycoprotein inhibitior + 0.7797 77.97%
P-glycoprotein substrate - 0.6643 66.43%
CYP3A4 substrate + 0.7322 73.22%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8833 88.33%
CYP3A4 inhibition - 0.8562 85.62%
CYP2C9 inhibition - 0.8614 86.14%
CYP2C19 inhibition - 0.9174 91.74%
CYP2D6 inhibition - 0.9396 93.96%
CYP1A2 inhibition - 0.8804 88.04%
CYP2C8 inhibition + 0.7133 71.33%
CYP inhibitory promiscuity - 0.9783 97.83%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5912 59.12%
Eye corrosion - 0.9891 98.91%
Eye irritation - 0.9136 91.36%
Skin irritation - 0.5826 58.26%
Skin corrosion - 0.9397 93.97%
Ames mutagenesis - 0.6500 65.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3977 39.77%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.8625 86.25%
skin sensitisation - 0.8698 86.98%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.7302 73.02%
Acute Oral Toxicity (c) III 0.5635 56.35%
Estrogen receptor binding + 0.7398 73.98%
Androgen receptor binding + 0.7250 72.50%
Thyroid receptor binding - 0.6552 65.52%
Glucocorticoid receptor binding + 0.6932 69.32%
Aromatase binding + 0.6744 67.44%
PPAR gamma + 0.7420 74.20%
Honey bee toxicity - 0.6958 69.58%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5500 55.00%
Fish aquatic toxicity + 0.9632 96.32%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.91% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.40% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.03% 96.09%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 91.90% 96.77%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.99% 95.56%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 88.56% 95.17%
CHEMBL221 P23219 Cyclooxygenase-1 88.20% 90.17%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.93% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.88% 95.89%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 82.72% 94.33%
CHEMBL5028 O14672 ADAM10 82.65% 97.50%
CHEMBL3714130 P46095 G-protein coupled receptor 6 82.62% 97.36%
CHEMBL340 P08684 Cytochrome P450 3A4 82.07% 91.19%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.82% 99.23%
CHEMBL5255 O00206 Toll-like receptor 4 80.10% 92.50%
CHEMBL2581 P07339 Cathepsin D 80.00% 98.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Panax stipuleanatus

Cross-Links

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PubChem 52943314
NPASS NPC469945
ChEMBL CHEMBL1288831
LOTUS LTS0236914
wikiData Q105002037