Pennogenin

Details

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Internal ID 0259eb1a-090a-41c1-bef3-166c4d46b72e
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids
IUPAC Name (1R,2S,4S,5'R,6R,7S,8S,9S,12S,13R,16S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-8,16-diol
SMILES (Canonical) CC1CCC2(C(C3(C(O2)CC4C3(CCC5C4CC=C6C5(CCC(C6)O)C)C)O)C)OC1
SMILES (Isomeric) C[C@@H]1CC[C@@]2([C@H]([C@]3([C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC=C6[C@@]5(CC[C@@H](C6)O)C)C)O)C)OC1
InChI InChI=1S/C27H42O4/c1-16-7-12-26(30-15-16)17(2)27(29)23(31-26)14-22-20-6-5-18-13-19(28)8-10-24(18,3)21(20)9-11-25(22,27)4/h5,16-17,19-23,28-29H,6-15H2,1-4H3/t16-,17-,19+,20-,21+,22+,23+,24+,25+,26-,27-/m1/s1
InChI Key SYYHBUHOUUETMI-WJOMMTHPSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C27H42O4
Molecular Weight 430.60 g/mol
Exact Mass 430.30830982 g/mol
Topological Polar Surface Area (TPSA) 58.90 Ų
XlogP 4.40
Atomic LogP (AlogP) 4.83
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 0

Synonyms

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507-89-1
(25R)-spirost-5-en-3beta,17alpha-diol
(1R,2S,4S,5'R,6R,7S,8S,9S,12S,13R,16S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-8,16-diol
CHEBI:71824
DTXSID80903924
HY-N7798
LMST01080041
AKOS040750458
(25R)-spirost-5-ene-3beta,17-diol
(3beta,25R)-spirost-5-en-3,17-diol
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Pennogenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9745 97.45%
Caco-2 - 0.5300 53.00%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.7747 77.47%
OATP2B1 inhibitior - 0.7154 71.54%
OATP1B1 inhibitior + 0.8779 87.79%
OATP1B3 inhibitior + 0.9599 95.99%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6102 61.02%
BSEP inhibitior + 0.8714 87.14%
P-glycoprotein inhibitior - 0.6463 64.63%
P-glycoprotein substrate + 0.6569 65.69%
CYP3A4 substrate + 0.7170 71.70%
CYP2C9 substrate - 0.5976 59.76%
CYP2D6 substrate - 0.7931 79.31%
CYP3A4 inhibition - 0.8892 88.92%
CYP2C9 inhibition - 0.9329 93.29%
CYP2C19 inhibition - 0.9461 94.61%
CYP2D6 inhibition - 0.9409 94.09%
CYP1A2 inhibition - 0.8551 85.51%
CYP2C8 inhibition + 0.7674 76.74%
CYP inhibitory promiscuity - 0.9404 94.04%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Danger 0.4556 45.56%
Eye corrosion - 0.9912 99.12%
Eye irritation - 0.9638 96.38%
Skin irritation + 0.6242 62.42%
Skin corrosion - 0.9385 93.85%
Ames mutagenesis - 0.9070 90.70%
Human Ether-a-go-go-Related Gene inhibition - 0.4245 42.45%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.5121 51.21%
skin sensitisation - 0.8988 89.88%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.9222 92.22%
Mitochondrial toxicity + 0.7750 77.50%
Nephrotoxicity - 0.5895 58.95%
Acute Oral Toxicity (c) III 0.4361 43.61%
Estrogen receptor binding + 0.7889 78.89%
Androgen receptor binding + 0.7907 79.07%
Thyroid receptor binding + 0.6095 60.95%
Glucocorticoid receptor binding + 0.8127 81.27%
Aromatase binding + 0.7318 73.18%
PPAR gamma + 0.5301 53.01%
Honey bee toxicity - 0.6509 65.09%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.9584 95.84%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.29% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.99% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.90% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.87% 97.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.69% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 91.09% 95.93%
CHEMBL1914 P06276 Butyrylcholinesterase 88.92% 95.00%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 87.95% 96.95%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 86.50% 89.05%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.38% 82.69%
CHEMBL3359 P21462 Formyl peptide receptor 1 83.66% 93.56%
CHEMBL3922 P50579 Methionine aminopeptidase 2 83.22% 97.28%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.04% 89.00%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 83.01% 94.08%
CHEMBL2095226 P05556 Integrin alpha-5/beta-1 82.58% 96.39%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 81.51% 93.04%
CHEMBL238 Q01959 Dopamine transporter 80.45% 95.88%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.45% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dioscorea bulbifera
Dioscorea composita
Dracaena cambodiana
Paris polyphylla
Polygonatum stenophyllum

Cross-Links

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PubChem 12314056
NPASS NPC86280
LOTUS LTS0263241
wikiData Q27139820