Patuletin 3-O-beta-gentiobioside

Details

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Internal ID 8386d2e2-6a42-41c7-9638-b47f3fb6e6a5
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-3-O-glycosides
IUPAC Name 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-6-methoxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxychromen-4-one
SMILES (Canonical) COC1=C(C2=C(C=C1O)OC(=C(C2=O)OC3C(C(C(C(O3)COC4C(C(C(C(O4)CO)O)O)O)O)O)O)C5=CC(=C(C=C5)O)O)O
SMILES (Isomeric) COC1=C(C2=C(C=C1O)OC(=C(C2=O)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O)O)O)C5=CC(=C(C=C5)O)O)O
InChI InChI=1S/C28H32O18/c1-41-25-11(32)5-12-15(18(25)35)19(36)26(24(43-12)8-2-3-9(30)10(31)4-8)46-28-23(40)21(38)17(34)14(45-28)7-42-27-22(39)20(37)16(33)13(6-29)44-27/h2-5,13-14,16-17,20-23,27-35,37-40H,6-7H2,1H3/t13-,14-,16-,17-,20+,21+,22-,23-,27-,28+/m1/s1
InChI Key WRDDFOFFQDOVRV-TURUJKBLSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C28H32O18
Molecular Weight 656.50 g/mol
Exact Mass 656.15886417 g/mol
Topological Polar Surface Area (TPSA) 295.00 Ų
XlogP -1.80
Atomic LogP (AlogP) -2.71
H-Bond Acceptor 18
H-Bond Donor 11
Rotatable Bonds 8

Synonyms

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DTXSID801306970
101021-28-7

2D Structure

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2D Structure of Patuletin 3-O-beta-gentiobioside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5457 54.57%
Caco-2 - 0.9157 91.57%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.5961 59.61%
OATP2B1 inhibitior - 0.5755 57.55%
OATP1B1 inhibitior + 0.8941 89.41%
OATP1B3 inhibitior + 0.9786 97.86%
MATE1 inhibitior - 0.7800 78.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.5820 58.20%
P-glycoprotein inhibitior - 0.5372 53.72%
P-glycoprotein substrate - 0.6380 63.80%
CYP3A4 substrate + 0.6407 64.07%
CYP2C9 substrate - 0.8415 84.15%
CYP2D6 substrate - 0.8515 85.15%
CYP3A4 inhibition - 0.9437 94.37%
CYP2C9 inhibition - 0.9060 90.60%
CYP2C19 inhibition - 0.8926 89.26%
CYP2D6 inhibition - 0.9515 95.15%
CYP1A2 inhibition - 0.9150 91.50%
CYP2C8 inhibition + 0.7770 77.70%
CYP inhibitory promiscuity - 0.7142 71.42%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6642 66.42%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.9087 90.87%
Skin irritation - 0.8320 83.20%
Skin corrosion - 0.9606 96.06%
Ames mutagenesis + 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3810 38.10%
Micronuclear + 0.6533 65.33%
Hepatotoxicity - 0.5125 51.25%
skin sensitisation - 0.9324 93.24%
Respiratory toxicity + 0.6000 60.00%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.9181 91.81%
Acute Oral Toxicity (c) III 0.6678 66.78%
Estrogen receptor binding + 0.8373 83.73%
Androgen receptor binding + 0.5947 59.47%
Thyroid receptor binding + 0.5249 52.49%
Glucocorticoid receptor binding + 0.5750 57.50%
Aromatase binding + 0.6074 60.74%
PPAR gamma + 0.7559 75.59%
Honey bee toxicity - 0.7494 74.94%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.6698 66.98%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.78% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.76% 85.14%
CHEMBL2581 P07339 Cathepsin D 95.86% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.54% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.54% 94.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.24% 96.09%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 92.49% 99.15%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.29% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.82% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 89.84% 94.73%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 87.34% 95.64%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.60% 99.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.92% 86.92%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.82% 96.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.34% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 81.66% 97.09%
CHEMBL1951 P21397 Monoamine oxidase A 81.58% 91.49%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Eriocaulon buergerianum
Spinacia oleracea

Cross-Links

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PubChem 21676285
LOTUS LTS0204863
wikiData Q105311175