Paederoside

Details

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Internal ID a196d896-f9bc-4a49-98ef-4005cfd40f9b
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name [(4S,7S,8S,11S)-2-oxo-8-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,9-dioxatricyclo[5.3.1.04,11]undeca-1(10),5-dien-6-yl]methyl methylsulfanylformate
SMILES (Canonical) CSC(=O)OCC1=CC2C3C1C(OC=C3C(=O)O2)OC4C(C(C(C(O4)CO)O)O)O
SMILES (Isomeric) CSC(=O)OCC1=C[C@H]2[C@H]3[C@@H]1[C@@H](OC=C3C(=O)O2)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O
InChI InChI=1S/C18H22O11S/c1-30-18(24)26-4-6-2-8-11-7(15(23)27-8)5-25-16(10(6)11)29-17-14(22)13(21)12(20)9(3-19)28-17/h2,5,8-14,16-17,19-22H,3-4H2,1H3/t8-,9+,10+,11-,12+,13-,14+,16-,17-/m0/s1
InChI Key OJISWUQNQQWEND-FCVLBCLDSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C18H22O11S
Molecular Weight 446.40 g/mol
Exact Mass 446.08828269 g/mol
Topological Polar Surface Area (TPSA) 187.00 Ų
XlogP -1.50
Atomic LogP (AlogP) -1.36
H-Bond Acceptor 12
H-Bond Donor 4
Rotatable Bonds 5

Synonyms

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20547-45-9
CHEBI:7888
CHEMBL517133
MEGxp0_000910
carbonothioic acid, O-[[(2aS,4aS,5S,7bS)-5-(beta-D-glucopyranosyloxy)-2a,4a,5,7b-tetrahydro-1-oxo-1H-2,6-dioxacyclopent[cd]inden-4-yl]methyl] S-methyl ester
ACon0_001258
ACon1_000548
AC1L9CTB
SCHEMBL422181
HY-N2432
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Paederoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6438 64.38%
Caco-2 - 0.8711 87.11%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.7293 72.93%
OATP2B1 inhibitior - 0.8570 85.70%
OATP1B1 inhibitior + 0.8233 82.33%
OATP1B3 inhibitior + 0.9424 94.24%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.7030 70.30%
P-glycoprotein inhibitior - 0.7608 76.08%
P-glycoprotein substrate - 0.7918 79.18%
CYP3A4 substrate + 0.6448 64.48%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8641 86.41%
CYP3A4 inhibition - 0.8432 84.32%
CYP2C9 inhibition - 0.7856 78.56%
CYP2C19 inhibition - 0.6968 69.68%
CYP2D6 inhibition - 0.8801 88.01%
CYP1A2 inhibition - 0.7928 79.28%
CYP2C8 inhibition - 0.6161 61.61%
CYP inhibitory promiscuity - 0.5984 59.84%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5411 54.11%
Eye corrosion - 0.9832 98.32%
Eye irritation - 0.9443 94.43%
Skin irritation - 0.7673 76.73%
Skin corrosion - 0.9346 93.46%
Ames mutagenesis - 0.5937 59.37%
Human Ether-a-go-go-Related Gene inhibition - 0.3650 36.50%
Micronuclear - 0.5600 56.00%
Hepatotoxicity - 0.6696 66.96%
skin sensitisation - 0.8478 84.78%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.8111 81.11%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity + 0.7643 76.43%
Acute Oral Toxicity (c) III 0.5363 53.63%
Estrogen receptor binding + 0.6909 69.09%
Androgen receptor binding + 0.5451 54.51%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding - 0.5982 59.82%
Aromatase binding + 0.6000 60.00%
PPAR gamma + 0.5320 53.20%
Honey bee toxicity - 0.7163 71.63%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.8109 81.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.87% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.30% 86.33%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 89.68% 91.11%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.65% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 89.32% 94.73%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.10% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.03% 89.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 82.73% 97.36%
CHEMBL2581 P07339 Cathepsin D 81.77% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.48% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Paederia foetida
Plocama calabrica
Saprosma scortechinii

Cross-Links

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PubChem 442432
LOTUS LTS0081698
wikiData Q27107605