Paclitaxel

Details

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Internal ID 5cf18857-97c2-4e49-b944-bac679af8a50
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > Taxanes and derivatives
IUPAC Name [(1S,2S,3R,4S,7R,9S,10S,12R,15S)-4,12-diacetyloxy-15-[(2R,3S)-3-benzamido-2-hydroxy-3-phenylpropanoyl]oxy-1,9-dihydroxy-10,14,17,17-tetramethyl-11-oxo-6-oxatetracyclo[11.3.1.03,10.04,7]heptadec-13-en-2-yl] benzoate
SMILES (Canonical) CC1=C2C(C(=O)C3(C(CC4C(C3C(C(C2(C)C)(CC1OC(=O)C(C(C5=CC=CC=C5)NC(=O)C6=CC=CC=C6)O)O)OC(=O)C7=CC=CC=C7)(CO4)OC(=O)C)O)C)OC(=O)C
SMILES (Isomeric) CC1=C2[C@H](C(=O)[C@@]3([C@H](C[C@@H]4[C@]([C@H]3[C@@H]([C@@](C2(C)C)(C[C@@H]1OC(=O)[C@@H]([C@H](C5=CC=CC=C5)NC(=O)C6=CC=CC=C6)O)O)OC(=O)C7=CC=CC=C7)(CO4)OC(=O)C)O)C)OC(=O)C
InChI InChI=1S/C47H51NO14/c1-25-31(60-43(56)36(52)35(28-16-10-7-11-17-28)48-41(54)29-18-12-8-13-19-29)23-47(57)40(61-42(55)30-20-14-9-15-21-30)38-45(6,32(51)22-33-46(38,24-58-33)62-27(3)50)39(53)37(59-26(2)49)34(25)44(47,4)5/h7-21,31-33,35-38,40,51-52,57H,22-24H2,1-6H3,(H,48,54)/t31-,32-,33+,35-,36+,37+,38-,40-,45+,46-,47+/m0/s1
InChI Key RCINICONZNJXQF-MZXODVADSA-N
Popularity 45,777 references in papers

Physical and Chemical Properties

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Molecular Formula C47H51NO14
Molecular Weight 853.90 g/mol
Exact Mass 853.33095530 g/mol
Topological Polar Surface Area (TPSA) 221.00 Ų
XlogP 2.50
Atomic LogP (AlogP) 3.74
H-Bond Acceptor 14
H-Bond Donor 4
Rotatable Bonds 10

Synonyms

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P88XT4IS4D
Paclitaxel
Taxol
Taxol A
Yewtaxan
Genaxol
Plaxicel
Abraxane
Ebetaxel
Genetaxyl
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Paclitaxel

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9470 94.70%
Caco-2 - 0.9373 93.73%
Blood Brain Barrier - 1.0000 100.00%
Human oral bioavailability - 0.9143 91.43%
Subcellular localzation Mitochondria 0.6557 65.57%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior - 0.7738 77.38%
OATP1B3 inhibitior + 0.9479 94.79%
MATE1 inhibitior - 0.8700 87.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.9715 97.15%
P-glycoprotein inhibitior + 0.7874 78.74%
P-glycoprotein substrate + 0.9535 95.35%
CYP3A4 substrate + 0.7980 79.80%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8698 86.98%
CYP3A4 inhibition - 0.8309 83.09%
CYP2C9 inhibition - 0.9071 90.71%
CYP2C19 inhibition - 0.9025 90.25%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition + 0.9817 98.17%
CYP inhibitory promiscuity - 0.8937 89.37%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.8800 88.00%
Carcinogenicity (trinary) Non-required 0.4813 48.13%
Eye corrosion - 0.9872 98.72%
Eye irritation - 0.9100 91.00%
Skin irritation - 0.7657 76.57%
Skin corrosion - 0.9352 93.52%
Ames mutagenesis - 0.9500 95.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7442 74.42%
Micronuclear + 0.7300 73.00%
Hepatotoxicity + 0.6749 67.49%
skin sensitisation - 0.8230 82.30%
Respiratory toxicity + 0.9333 93.33%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity + 0.6119 61.19%
Acute Oral Toxicity (c) III 0.5918 59.18%
Estrogen receptor binding + 0.8148 81.48%
Androgen receptor binding + 0.8337 83.37%
Thyroid receptor binding + 0.7275 72.75%
Glucocorticoid receptor binding + 0.7632 76.32%
Aromatase binding + 0.6028 60.28%
PPAR gamma + 0.8011 80.11%
Honey bee toxicity - 0.6301 63.01%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.9852 98.52%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293236 P46063 ATP-dependent DNA helicase Q1 15848.9 nM
Potency
via CMAUP
CHEMBL1293237 P54132 Bloom syndrome protein 17782.8 nM
17782.8 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL4096 P04637 Cellular tumor antigen p53 7943.3 nM
Potency
via CMAUP
CHEMBL3356 P05177 Cytochrome P450 1A2 31622.78 nM
AC50
via CMAUP
CHEMBL3397 P11712 Cytochrome P450 2C9 25118.86 nM
AC50
via CMAUP
CHEMBL340 P08684 Cytochrome P450 3A4 1258.9 nM
1258.9 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL236 P41143 Delta opioid receptor 4202 nM
IC50
via CMAUP
CHEMBL4159 Q99714 Endoplasmic reticulum-associated amyloid beta-peptide-binding protein 2511.9 nM
Potency
via CMAUP
CHEMBL1293278 O75496 Geminin 22.4 nM
22.4 nM
Potency
Potency
via Super-PRED
via CMAUP
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 15848.9 nM
15848.9 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL1907598 P05106 Integrin alpha-V/beta-3 34 nM
IC50
via Super-PRED
CHEMBL1293224 P10636 Microtubule-associated protein tau 22387.2 nM
44668.4 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL2327 P21452 Neurokinin 2 receptor 6125 nM
IC50
via CMAUP
CHEMBL5162 Q6W5P4 Neuropeptide S receptor 12589.3 nM
Potency
via CMAUP
CHEMBL1293277 O15118 Niemann-Pick C1 protein 562.3 nM
562.3 nM
3548.1 nM
Potency
Potency
Potency
via CMAUP
via Super-PRED
via CMAUP
CHEMBL1293298 Q01453 Peripheral myelin protein 22 47.8 nM
47.8 nM
Potency
Potency
via CMAUP
via Super-PRED
CHEMBL1293235 P02545 Prelamin-A/C 1.8 nM
35.5 nM
35.5 nM
63.1 nM
1.8 nM
Potency
Potency
Potency
Potency
Potency
via CMAUP
via CMAUP
via CMAUP
via CMAUP
via Super-PRED
CHEMBL5331 Q12866 Proto-oncogene tyrosine-protein kinase MER 4900 nM
IC50
PMID: 27238842
CHEMBL1293294 P51151 Ras-related protein Rab-9A 89.1 nM
89.1 nM
Potency
Potency
via Super-PRED
via CMAUP
CHEMBL1824 P04626 Receptor protein-tyrosine kinase erbB-2 11108 nM
IC50
via CMAUP
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 369 nM
130.9 nM
130.9 nM
Potency
Potency
Potency
via CMAUP
via CMAUP
via Super-PRED
CHEMBL1697668 Q9Y6L6 Solute carrier organic anion transporter family member 1B1 280 nM
IC50
PMID: 25618019
CHEMBL1743121 Q9NPD5 Solute carrier organic anion transporter family member 1B3 260 nM
IC50
PMID: 25618019
CHEMBL1293232 Q16637 Survival motor neuron protein 10000 nM
Potency
via CMAUP
CHEMBL1293256 P40225 Thrombopoietin 12589.3 nM
12589.3 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL1947 P10828 Thyroid hormone receptor beta-1 707.9 nM
707.9 nM
Potency
Potency
via Super-PRED
via CMAUP
CHEMBL2597 Q13509 Tubulin beta-3 chain 7.7 nM
9.2 nM
7.7 nM
IC50
IC50
IC50
PMID: 23895532
PMID: 23332369
via Super-PRED
CHEMBL1841 P06241 Tyrosine-protein kinase FYN 23906 nM
IC50
via CMAUP
CHEMBL1293227 O75604 Ubiquitin carboxyl-terminal hydrolase 2 3981.1 nM
Potency
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL221 P23219 Cyclooxygenase-1 99.80% 90.17%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.96% 85.14%
CHEMBL2581 P07339 Cathepsin D 98.07% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.79% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.60% 96.09%
CHEMBL1951 P21397 Monoamine oxidase A 92.55% 91.49%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.02% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.89% 95.56%
CHEMBL2535 P11166 Glucose transporter 90.60% 98.75%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.54% 99.23%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 90.47% 96.47%
CHEMBL5028 O14672 ADAM10 90.35% 97.50%
CHEMBL340 P08684 Cytochrome P450 3A4 89.78% 91.19%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 88.12% 95.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.80% 94.45%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 87.68% 97.14%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 87.06% 83.00%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 86.68% 94.62%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.22% 89.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.67% 97.09%
CHEMBL4267 P37173 TGF-beta receptor type II 84.60% 88.18%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.34% 96.00%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 83.78% 98.75%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 83.67% 94.08%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 82.95% 92.67%
CHEMBL4302 P08183 P-glycoprotein 1 82.83% 92.98%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.22% 99.17%
CHEMBL4208 P20618 Proteasome component C5 80.37% 90.00%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 80.07% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Afrocarpus gracilior
Corylus avellana
Dioscorea communis
Garcinia mangostana
Punica granatum
Taxus baccata
Taxus brevifolia
Taxus canadensis
Taxus cuspidata
Taxus floridana
Taxus mairei
Taxus sumatrana
Taxus wallichiana
Taxus wallichiana var. chinensis
Torreya grandis

Cross-Links

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PubChem 36314
NPASS NPC208553
ChEMBL CHEMBL428647
LOTUS LTS0163460
wikiData Q423762