Ovalicin

Details

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Internal ID 95e65c7d-8011-4839-8e2f-998df0b5c0ce
Taxonomy Organic oxygen compounds > Organooxygen compounds > Alcohols and polyols > Tertiary alcohols
IUPAC Name (3S,4R,5S)-4-hydroxy-5-methoxy-4-[(2S,3R)-2-methyl-3-(3-methylbut-2-enyl)oxiran-2-yl]-1-oxaspiro[2.5]octan-6-one
SMILES (Canonical) CC(=CCC1C(O1)(C)C2(C(C(=O)CCC23CO3)OC)O)C
SMILES (Isomeric) CC(=CC[C@@H]1[C@@](O1)(C)[C@]2([C@@H](C(=O)CC[C@]23CO3)OC)O)C
InChI InChI=1S/C16H24O5/c1-10(2)5-6-12-14(3,21-12)16(18)13(19-4)11(17)7-8-15(16)9-20-15/h5,12-13,18H,6-9H2,1-4H3/t12-,13-,14+,15+,16+/m1/s1
InChI Key NESRXFGQJARQNM-OWYFMNJBSA-N
Popularity 41 references in papers

Physical and Chemical Properties

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Molecular Formula C16H24O5
Molecular Weight 296.36 g/mol
Exact Mass 296.16237386 g/mol
Topological Polar Surface Area (TPSA) 71.60 Ų
XlogP 0.60
Atomic LogP (AlogP) 1.38
H-Bond Acceptor 5
H-Bond Donor 1
Rotatable Bonds 4

Synonyms

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(-)-Ovalicin
Graphinone
19683-98-8
XBF6GMZ9TW
CHEMBL562231
1-Oxaspiro(2,5)octan-6-one, 4-(1,2-epoxy-1,5-dimethyl-4-hexenyl)-4-hydroxy-5-methoxy-, (1S,2R,3S,4R,5S)-(-)-
1-Oxaspiro[2.5]octan-6-one, 4-(1,2-epoxy-1,5-dimethyl-4-hexenyl)-4-hydroxy-5-methoxy-, (1S,2R,3S,4R,5S)-(-)-
UNII-XBF6GMZ9TW
SCHEMBL15624476
BDBM50295172
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Ovalicin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9709 97.09%
Caco-2 + 0.7342 73.42%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.8746 87.46%
OATP2B1 inhibitior - 0.8565 85.65%
OATP1B1 inhibitior + 0.8823 88.23%
OATP1B3 inhibitior + 0.9300 93.00%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.6458 64.58%
P-glycoprotein inhibitior - 0.7828 78.28%
P-glycoprotein substrate - 0.8082 80.82%
CYP3A4 substrate + 0.6230 62.30%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8131 81.31%
CYP3A4 inhibition - 0.9131 91.31%
CYP2C9 inhibition - 0.7149 71.49%
CYP2C19 inhibition - 0.7690 76.90%
CYP2D6 inhibition - 0.9315 93.15%
CYP1A2 inhibition - 0.8012 80.12%
CYP2C8 inhibition - 0.7835 78.35%
CYP inhibitory promiscuity - 0.9004 90.04%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6417 64.17%
Eye corrosion - 0.9834 98.34%
Eye irritation - 0.8853 88.53%
Skin irritation - 0.7026 70.26%
Skin corrosion - 0.9560 95.60%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6032 60.32%
Micronuclear - 0.6600 66.00%
Hepatotoxicity + 0.5703 57.03%
skin sensitisation - 0.7416 74.16%
Respiratory toxicity + 0.5333 53.33%
Reproductive toxicity + 0.6444 64.44%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity + 0.7170 71.70%
Acute Oral Toxicity (c) III 0.4976 49.76%
Estrogen receptor binding + 0.7664 76.64%
Androgen receptor binding + 0.6145 61.45%
Thyroid receptor binding + 0.6544 65.44%
Glucocorticoid receptor binding - 0.5649 56.49%
Aromatase binding - 0.5433 54.33%
PPAR gamma + 0.6322 63.22%
Honey bee toxicity - 0.6305 63.05%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.8848 88.48%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL3922 P50579 Methionine aminopeptidase 2 0.4 nM
IC50
PMID: 19209899

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.35% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.84% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.37% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 90.48% 85.14%
CHEMBL253 P34972 Cannabinoid CB2 receptor 90.40% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.60% 95.56%
CHEMBL2581 P07339 Cathepsin D 88.31% 98.95%
CHEMBL3922 P50579 Methionine aminopeptidase 2 86.94% 97.28%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.86% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.21% 86.33%
CHEMBL1937 Q92769 Histone deacetylase 2 85.68% 94.75%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 84.39% 91.07%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.09% 92.62%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.69% 92.94%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.70% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.87% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Clausena heptaphylla
Sarcomelicope glauca
Stemona japonica

Cross-Links

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PubChem 10957430
NPASS NPC236176
ChEMBL CHEMBL562231
LOTUS LTS0239842
wikiData Q105178164