Nortriptyline

Details

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Internal ID e736713e-e8b2-489f-baae-264b3f2d3b63
Taxonomy Benzenoids > Dibenzocycloheptenes
IUPAC Name N-methyl-3-(2-tricyclo[9.4.0.03,8]pentadeca-1(15),3,5,7,11,13-hexaenylidene)propan-1-amine
SMILES (Canonical) CNCCC=C1C2=CC=CC=C2CCC3=CC=CC=C31
SMILES (Isomeric) CNCCC=C1C2=CC=CC=C2CCC3=CC=CC=C31
InChI InChI=1S/C19H21N/c1-20-14-6-11-19-17-9-4-2-7-15(17)12-13-16-8-3-5-10-18(16)19/h2-5,7-11,20H,6,12-14H2,1H3
InChI Key PHVGLTMQBUFIQQ-UHFFFAOYSA-N
Popularity 8,184 references in papers

Physical and Chemical Properties

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Molecular Formula C19H21N
Molecular Weight 263.40 g/mol
Exact Mass 263.167399674 g/mol
Topological Polar Surface Area (TPSA) 12.00 Ų
XlogP 4.50
Atomic LogP (AlogP) 3.83
H-Bond Acceptor 1
H-Bond Donor 1
Rotatable Bonds 3

Synonyms

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Aventyl
72-69-5
Desitriptilina
Noramitriptyline
Lumbeck
Desmethylamitriptyline
Noritren
Sensaval
Ateben
Avantyl
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Nortriptyline

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9947 99.47%
Caco-2 + 0.9406 94.06%
Blood Brain Barrier + 1.0000 100.00%
Human oral bioavailability + 0.9714 97.14%
Subcellular localzation Lysosomes 0.8521 85.21%
OATP2B1 inhibitior - 0.8854 88.54%
OATP1B1 inhibitior + 0.9369 93.69%
OATP1B3 inhibitior + 0.9467 94.67%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior + 0.9000 90.00%
BSEP inhibitior + 0.8594 85.94%
P-glycoprotein inhibitior + 0.6050 60.50%
P-glycoprotein substrate - 0.7548 75.48%
CYP3A4 substrate + 0.5857 58.57%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.6766 67.66%
CYP3A4 inhibition - 0.7665 76.65%
CYP2C9 inhibition - 0.9070 90.70%
CYP2C19 inhibition - 0.9025 90.25%
CYP2D6 inhibition + 0.8932 89.32%
CYP1A2 inhibition + 0.9107 91.07%
CYP2C8 inhibition - 0.9375 93.75%
CYP inhibitory promiscuity - 0.5194 51.94%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.7865 78.65%
Eye corrosion - 0.9911 99.11%
Eye irritation - 0.9541 95.41%
Skin irritation - 0.5325 53.25%
Skin corrosion - 0.6365 63.65%
Ames mutagenesis - 0.8900 89.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7128 71.28%
Micronuclear - 0.7300 73.00%
Hepatotoxicity - 0.5750 57.50%
skin sensitisation - 0.5928 59.28%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.5444 54.44%
Mitochondrial toxicity + 0.9000 90.00%
Nephrotoxicity - 0.5843 58.43%
Acute Oral Toxicity (c) III 0.8000 80.00%
Estrogen receptor binding + 0.6650 66.50%
Androgen receptor binding + 0.7438 74.38%
Thyroid receptor binding + 0.7195 71.95%
Glucocorticoid receptor binding - 0.6015 60.15%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.8450 84.50%
Honey bee toxicity - 0.9381 93.81%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.7200 72.00%
Fish aquatic toxicity + 0.9456 94.56%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL223 P25100 Alpha-1d adrenergic receptor 273 nM
IC50
via CMAUP
CHEMBL1867 P08913 Alpha-2a adrenergic receptor 732 nM
IC50
via CMAUP
CHEMBL1942 P18089 Alpha-2b adrenergic receptor 94 nM
IC50
via CMAUP
CHEMBL1916 P18825 Alpha-2c adrenergic receptor 203 nM
IC50
via CMAUP
CHEMBL4096 P04637 Cellular tumor antigen p53 19952.6 nM
19952.6 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL3356 P05177 Cytochrome P450 1A2 25118.86 nM
7943.28 nM
AC50
AC50
via CMAUP
via CMAUP
CHEMBL3622 P33261 Cytochrome P450 2C19 3000 nM
IC50
via CMAUP
CHEMBL3721 P10632 Cytochrome P450 2C8 49900 nM
Ki
PMID: 16248836
CHEMBL289 P10635 Cytochrome P450 2D6 2600 nM
2300 nM
IC50
IC50
PMID: 15481972
PMID: 12502361
CHEMBL340 P08684 Cytochrome P450 3A4 12589.3 nM
15848.9 nM
12589.3 nM
15848.9 nM
Potency
Potency
Potency
Potency
via CMAUP
via CMAUP
via CMAUP
via CMAUP
CHEMBL2056 P21728 Dopamine D1 receptor 539 nM
IC50
via CMAUP
CHEMBL234 P35462 Dopamine D3 receptor 179 nM
IC50
via CMAUP
CHEMBL238 Q01959 Dopamine transporter 1678 nM
IC50
via CMAUP
CHEMBL231 P35367 Histamine H1 receptor 50 nM
IC50
via CMAUP
CHEMBL1941 P25021 Histamine H2 receptor 2334 nM
IC50
via CMAUP
CHEMBL5514 P42858 Huntingtin 25118.9 nM
Potency
via CMAUP
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 82 nM
IC50
via CMAUP
CHEMBL211 P08172 Muscarinic acetylcholine receptor M2 347 nM
IC50
via CMAUP
CHEMBL245 P20309 Muscarinic acetylcholine receptor M3 171 nM
IC50
via CMAUP
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 95 nM
IC50
via CMAUP
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 27 nM
IC50
via CMAUP
CHEMBL222 P23975 Norepinephrine transporter 3.21 nM
IC50
via CMAUP
CHEMBL1293235 P02545 Prelamin-A/C 35.5 nM
35.5 nM
251.2 nM
Potency
Potency
Potency
via Super-PRED
via CMAUP
via CMAUP
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 23280.9 nM
23280.9 nM
23280.9 nM
Potency
Potency
Potency
via CMAUP
via CMAUP
via CMAUP
CHEMBL224 P28223 Serotonin 2a (5-HT2a) receptor 51 nM
IC50
via CMAUP
CHEMBL1833 P41595 Serotonin 2b (5-HT2b) receptor 136 nM
IC50
via CMAUP
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 16 nM
IC50
via CMAUP
CHEMBL3371 P50406 Serotonin 6 (5-HT6) receptor 554 nM
214 nM
IC50
Ki
via CMAUP
via Super-PRED
CHEMBL228 P31645 Serotonin transporter 13 nM
IC50
via CMAUP
CHEMBL1293256 P40225 Thrombopoietin 12589.3 nM
12589.3 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL1963 P16473 Thyroid stimulating hormone receptor 7943.3 nM
7943.3 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 5000 nM
1500 nM
IC50
IC50
via CMAUP
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 94.97% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.02% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 91.66% 91.49%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.07% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.05% 95.56%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 84.81% 95.83%
CHEMBL3401 O75469 Pregnane X receptor 82.31% 94.73%
CHEMBL222 P23975 Norepinephrine transporter 82.26% 96.06%
CHEMBL1841 P06241 Tyrosine-protein kinase FYN 82.18% 81.29%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.84% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.12% 99.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Senegalia berlandieri
Thymus quinquecostatus
Thymus vulgaris

Cross-Links

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PubChem 4543
NPASS NPC133162
ChEMBL CHEMBL445
LOTUS LTS0261727
wikiData Q61387