Nordentatin

Details

Top
Internal ID a3dff66e-7c2e-45ef-8d47-c154daf5e7d9
Taxonomy Phenylpropanoids and polyketides > Coumarins and derivatives > Pyranocoumarins > Angular pyranocoumarins
IUPAC Name 5-hydroxy-2,2-dimethyl-6-(2-methylbut-3-en-2-yl)pyrano[2,3-h]chromen-8-one
SMILES (Canonical) CC1(C=CC2=C(O1)C3=C(C(=C2O)C(C)(C)C=C)OC(=O)C=C3)C
SMILES (Isomeric) CC1(C=CC2=C(O1)C3=C(C(=C2O)C(C)(C)C=C)OC(=O)C=C3)C
InChI InChI=1S/C19H20O4/c1-6-18(2,3)14-15(21)11-9-10-19(4,5)23-16(11)12-7-8-13(20)22-17(12)14/h6-10,21H,1H2,2-5H3
InChI Key FREXEHTVBRSRGJ-UHFFFAOYSA-N
Popularity 14 references in papers

Physical and Chemical Properties

Top
Molecular Formula C19H20O4
Molecular Weight 312.40 g/mol
Exact Mass 312.13615911 g/mol
Topological Polar Surface Area (TPSA) 55.80 Ų
XlogP 4.40
Atomic LogP (AlogP) 4.15
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 2

Synonyms

Top
17820-07-4
5-hydroxy-2,2-dimethyl-6-(2-methylbut-3-en-2-yl)pyrano[2,3-h]chromen-8-one
CHEMBL509649
DTXSID10170440
AKOS040735544
2H,8H-Benzo(1,2-b:3,4-b')dipyran-8-one, 6-(1,1-dimethyl-2-propenyl)-5-hydroxy-2,2-dimethyl-

2D Structure

Top
2D Structure of Nordentatin

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9828 98.28%
Caco-2 + 0.5613 56.13%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability + 0.6143 61.43%
Subcellular localzation Mitochondria 0.7164 71.64%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8482 84.82%
OATP1B3 inhibitior + 0.9663 96.63%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.6466 64.66%
P-glycoprotein inhibitior - 0.5068 50.68%
P-glycoprotein substrate - 0.7066 70.66%
CYP3A4 substrate + 0.5912 59.12%
CYP2C9 substrate - 0.6381 63.81%
CYP2D6 substrate - 0.8370 83.70%
CYP3A4 inhibition + 0.5073 50.73%
CYP2C9 inhibition - 0.6613 66.13%
CYP2C19 inhibition - 0.7039 70.39%
CYP2D6 inhibition - 0.9236 92.36%
CYP1A2 inhibition - 0.6697 66.97%
CYP2C8 inhibition + 0.4440 44.40%
CYP inhibitory promiscuity - 0.7759 77.59%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9713 97.13%
Carcinogenicity (trinary) Non-required 0.4727 47.27%
Eye corrosion - 0.9873 98.73%
Eye irritation + 0.6665 66.65%
Skin irritation - 0.6491 64.91%
Skin corrosion - 0.9385 93.85%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5593 55.93%
Micronuclear + 0.6459 64.59%
Hepatotoxicity + 0.7676 76.76%
skin sensitisation - 0.7153 71.53%
Respiratory toxicity - 0.5000 50.00%
Reproductive toxicity + 0.5667 56.67%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.7269 72.69%
Acute Oral Toxicity (c) III 0.4676 46.76%
Estrogen receptor binding + 0.9534 95.34%
Androgen receptor binding + 0.6154 61.54%
Thyroid receptor binding + 0.7550 75.50%
Glucocorticoid receptor binding + 0.8938 89.38%
Aromatase binding + 0.9011 90.11%
PPAR gamma + 0.8346 83.46%
Honey bee toxicity - 0.7864 78.64%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9943 99.43%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.94% 91.11%
CHEMBL2581 P07339 Cathepsin D 95.27% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.37% 95.56%
CHEMBL1951 P21397 Monoamine oxidase A 93.35% 91.49%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.08% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.29% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 87.85% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.84% 99.23%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 85.55% 90.93%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 84.89% 89.34%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 81.26% 100.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Citrus × aurantium
Citrus maxima
Citrus medica
Citrus trifoliata
Clausena excavata
Clausena harmandiana
Enkleia malaccensis
Paramignya monophylla

Cross-Links

Top
PubChem 5320206
LOTUS LTS0024471
wikiData Q83040354