Nidulalin A

Details

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Internal ID 5121b941-e838-4f80-beed-eeca31411b9b
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name methyl (4R,4aS)-4,8-dihydroxy-6-methyl-9-oxo-4H-xanthene-4a-carboxylate
SMILES (Canonical) CC1=CC(=C2C(=C1)OC3(C(C=CC=C3C2=O)O)C(=O)OC)O
SMILES (Isomeric) CC1=CC(=C2C(=C1)O[C@@]3([C@@H](C=CC=C3C2=O)O)C(=O)OC)O
InChI InChI=1S/C16H14O6/c1-8-6-10(17)13-11(7-8)22-16(15(20)21-2)9(14(13)19)4-3-5-12(16)18/h3-7,12,17-18H,1-2H3/t12-,16+/m1/s1
InChI Key BVPTZDRKEDPTOX-WBMJQRKESA-N
Popularity 18 references in papers

Physical and Chemical Properties

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Molecular Formula C16H14O6
Molecular Weight 302.28 g/mol
Exact Mass 302.07903816 g/mol
Topological Polar Surface Area (TPSA) 93.10 Ų
XlogP 2.60
Atomic LogP (AlogP) 1.04
H-Bond Acceptor 6
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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CHEMBL91382
CHEBI:66625
F390
methyl (4R,4aS)-4,8-dihydroxy-6-methyl-9-oxo-4,9-dihydro-4aH-xanthene-4a-carboxylate
MEGxm0_000109
BDBM50081427
Q27135244
methyl (4R,4aS)-4,8-dihydroxy-6-methyl-9-oxo-4H-xanthene-4a-carboxylate
(4R,4aS)-4,8-Dihydroxy-6-methyl-9-oxo-4,9-dihydro-xanthene-4a-carboxylic acid methyl ester

2D Structure

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2D Structure of Nidulalin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9765 97.65%
Caco-2 - 0.5388 53.88%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability + 0.6429 64.29%
Subcellular localzation Mitochondria 0.7418 74.18%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8944 89.44%
OATP1B3 inhibitior + 0.9569 95.69%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.6336 63.36%
P-glycoprotein inhibitior - 0.7426 74.26%
P-glycoprotein substrate - 0.7561 75.61%
CYP3A4 substrate + 0.5786 57.86%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8550 85.50%
CYP3A4 inhibition - 0.7537 75.37%
CYP2C9 inhibition - 0.5461 54.61%
CYP2C19 inhibition + 0.5180 51.80%
CYP2D6 inhibition - 0.8120 81.20%
CYP1A2 inhibition - 0.6533 65.33%
CYP2C8 inhibition - 0.5626 56.26%
CYP inhibitory promiscuity + 0.5248 52.48%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9618 96.18%
Carcinogenicity (trinary) Danger 0.4550 45.50%
Eye corrosion - 0.9808 98.08%
Eye irritation - 0.5704 57.04%
Skin irritation - 0.6097 60.97%
Skin corrosion - 0.9392 93.92%
Ames mutagenesis - 0.5700 57.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8012 80.12%
Micronuclear + 0.8100 81.00%
Hepatotoxicity + 0.6117 61.17%
skin sensitisation - 0.7768 77.68%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7125 71.25%
Nephrotoxicity + 0.5769 57.69%
Acute Oral Toxicity (c) III 0.5195 51.95%
Estrogen receptor binding + 0.7863 78.63%
Androgen receptor binding + 0.6888 68.88%
Thyroid receptor binding + 0.5131 51.31%
Glucocorticoid receptor binding + 0.8185 81.85%
Aromatase binding + 0.5885 58.85%
PPAR gamma + 0.7633 76.33%
Honey bee toxicity - 0.7757 77.57%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9700 97.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.37% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 97.14% 94.45%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 96.12% 96.38%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.81% 85.14%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.60% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.59% 99.23%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.34% 96.09%
CHEMBL2581 P07339 Cathepsin D 91.74% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.43% 94.00%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 88.25% 94.80%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.79% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 86.58% 94.73%
CHEMBL340 P08684 Cytochrome P450 3A4 85.99% 91.19%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.74% 91.07%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 83.08% 93.03%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 82.79% 92.88%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gelsemium sempervirens

Cross-Links

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PubChem 9926413
LOTUS LTS0153084
wikiData Q27135244