[(2R,3R,6S)-2-[(8S,9S,10R,13S,14S,17S)-10,13-dimethyl-3-oxo-1,2,6,7,8,9,11,12,14,15,16,17-dodecahydrocyclopenta[a]phenanthren-17-yl]-2-hydroxy-6-methyl-7-[(2R,3S,4R,5R)-3,4,5-trihydroxyoxan-2-yl]oxyheptan-3-yl] acetate

Details

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Internal ID fdad87dd-78a6-4d20-a4d1-f5edb24a63b5
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name [(2R,3R,6S)-2-[(8S,9S,10R,13S,14S,17S)-10,13-dimethyl-3-oxo-1,2,6,7,8,9,11,12,14,15,16,17-dodecahydrocyclopenta[a]phenanthren-17-yl]-2-hydroxy-6-methyl-7-[(2R,3S,4R,5R)-3,4,5-trihydroxyoxan-2-yl]oxyheptan-3-yl] acetate
SMILES (Canonical) CC(CCC(C(C)(C1CCC2C1(CCC3C2CCC4=CC(=O)CCC34C)C)O)OC(=O)C)COC5C(C(C(CO5)O)O)O
SMILES (Isomeric) C[C@@H](CC[C@H]([C@@](C)([C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CCC4=CC(=O)CC[C@]34C)C)O)OC(=O)C)CO[C@H]5[C@H]([C@@H]([C@@H](CO5)O)O)O
InChI InChI=1S/C34H54O9/c1-19(17-41-31-30(39)29(38)26(37)18-42-31)6-11-28(43-20(2)35)34(5,40)27-10-9-24-23-8-7-21-16-22(36)12-14-32(21,3)25(23)13-15-33(24,27)4/h16,19,23-31,37-40H,6-15,17-18H2,1-5H3/t19-,23-,24-,25-,26+,27-,28+,29+,30-,31+,32-,33-,34+/m0/s1
InChI Key PXKRFTADVDFUAR-DQOOJKMJSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C34H54O9
Molecular Weight 606.80 g/mol
Exact Mass 606.37678330 g/mol
Topological Polar Surface Area (TPSA) 143.00 Ų
XlogP 3.40
Atomic LogP (AlogP) 3.69
H-Bond Acceptor 9
H-Bond Donor 4
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2R,3R,6S)-2-[(8S,9S,10R,13S,14S,17S)-10,13-dimethyl-3-oxo-1,2,6,7,8,9,11,12,14,15,16,17-dodecahydrocyclopenta[a]phenanthren-17-yl]-2-hydroxy-6-methyl-7-[(2R,3S,4R,5R)-3,4,5-trihydroxyoxan-2-yl]oxyheptan-3-yl] acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8292 82.92%
Caco-2 - 0.8462 84.62%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.8432 84.32%
OATP2B1 inhibitior - 0.5676 56.76%
OATP1B1 inhibitior + 0.8776 87.76%
OATP1B3 inhibitior + 0.9108 91.08%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6798 67.98%
BSEP inhibitior + 0.6827 68.27%
P-glycoprotein inhibitior + 0.7144 71.44%
P-glycoprotein substrate + 0.5463 54.63%
CYP3A4 substrate + 0.7776 77.76%
CYP2C9 substrate - 0.8019 80.19%
CYP2D6 substrate - 0.9028 90.28%
CYP3A4 inhibition - 0.9052 90.52%
CYP2C9 inhibition - 0.9072 90.72%
CYP2C19 inhibition - 0.9129 91.29%
CYP2D6 inhibition - 0.9461 94.61%
CYP1A2 inhibition - 0.8827 88.27%
CYP2C8 inhibition + 0.5228 52.28%
CYP inhibitory promiscuity - 0.9558 95.58%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6660 66.60%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.9333 93.33%
Skin irritation + 0.5585 55.85%
Skin corrosion - 0.9408 94.08%
Ames mutagenesis - 0.7400 74.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6842 68.42%
Micronuclear - 0.7600 76.00%
Hepatotoxicity - 0.5606 56.06%
skin sensitisation - 0.9276 92.76%
Respiratory toxicity + 0.8333 83.33%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.7625 76.25%
Nephrotoxicity - 0.8998 89.98%
Acute Oral Toxicity (c) III 0.4564 45.64%
Estrogen receptor binding + 0.7634 76.34%
Androgen receptor binding + 0.7917 79.17%
Thyroid receptor binding - 0.6643 66.43%
Glucocorticoid receptor binding + 0.6217 62.17%
Aromatase binding + 0.6684 66.84%
PPAR gamma + 0.6344 63.44%
Honey bee toxicity - 0.6959 69.59%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.9764 97.64%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.08% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.45% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.88% 96.09%
CHEMBL2581 P07339 Cathepsin D 96.94% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 96.55% 100.00%
CHEMBL4040 P28482 MAP kinase ERK2 96.03% 83.82%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.46% 94.45%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.50% 85.14%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 92.13% 95.89%
CHEMBL1871 P10275 Androgen Receptor 91.81% 96.43%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 90.07% 96.77%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.91% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.91% 89.00%
CHEMBL4581 P52732 Kinesin-like protein 1 88.86% 93.18%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 88.29% 95.71%
CHEMBL226 P30542 Adenosine A1 receptor 87.91% 95.93%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.93% 95.56%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 85.86% 97.14%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 85.72% 92.62%
CHEMBL5028 O14672 ADAM10 84.74% 97.50%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 84.04% 92.78%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.93% 90.71%
CHEMBL3746 P80365 11-beta-hydroxysteroid dehydrogenase 2 83.15% 94.78%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.03% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.29% 86.33%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.99% 100.00%
CHEMBL340 P08684 Cytochrome P450 3A4 80.64% 91.19%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.64% 91.07%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 80.34% 82.69%
CHEMBL204 P00734 Thrombin 80.23% 96.01%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Pulicaria undulata subsp. undulata
Pyrus communis

Cross-Links

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PubChem 53483751
NPASS NPC228333