Methyl pheophorbide a

Details

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Internal ID 5740e994-be76-4b71-b445-a26d6fba5415
Taxonomy Organoheterocyclic compounds > Tetrapyrroles and derivatives
IUPAC Name methyl (3R,21S,22S)-16-ethenyl-11-ethyl-4-hydroxy-22-(3-methoxy-3-oxopropyl)-12,17,21,26-tetramethyl-7,23,24,25-tetrazahexacyclo[18.2.1.15,8.110,13.115,18.02,6]hexacosa-1,4,6,8(26),9,11,13(25),14,16,18(24),19-undecaene-3-carboxylate
SMILES (Canonical) CCC1=C(C2=NC1=CC3=C(C4=C(C(C(=C5C(C(C(=CC6=NC(=C2)C(=C6C)C=C)N5)C)CCC(=O)OC)C4=N3)C(=O)OC)O)C)C
SMILES (Isomeric) CCC1=C(C2=NC1=CC3=C(C4=C([C@@H](C(=C5[C@H]([C@@H](C(=CC6=NC(=C2)C(=C6C)C=C)N5)C)CCC(=O)OC)C4=N3)C(=O)OC)O)C)C
InChI InChI=1S/C36H38N4O5/c1-9-20-16(3)23-13-25-18(5)22(11-12-29(41)44-7)33(39-25)31-32(36(43)45-8)35(42)30-19(6)26(40-34(30)31)15-28-21(10-2)17(4)24(38-28)14-27(20)37-23/h9,13-15,18,22,32,39,42H,1,10-12H2,2-8H3/t18-,22-,32+/m0/s1
InChI Key HUXSMOZWPXDRTN-SDHKEVEOSA-N
Popularity 14 references in papers

Physical and Chemical Properties

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Molecular Formula C36H38N4O5
Molecular Weight 606.70 g/mol
Exact Mass 606.28422033 g/mol
Topological Polar Surface Area (TPSA) 122.00 Ų
XlogP 3.10
Atomic LogP (AlogP) 6.20
H-Bond Acceptor 9
H-Bond Donor 2
Rotatable Bonds 6

Synonyms

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5594-30-9
3-Phorbinepropanoic acid, 9-ethenyl-14-ethyl-21-(methoxycarbonyl)-4,8,13,18-tetramethyl-20-oxo-, methyl ester, (3S,4S,21R)-
SCHEMBL823285
CHEMBL504821
DTXSID701314958
HY-N10902
CS-0637480

2D Structure

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2D Structure of Methyl pheophorbide a

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9282 92.82%
Caco-2 - 0.8117 81.17%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.6990 69.90%
OATP2B1 inhibitior - 0.5706 57.06%
OATP1B1 inhibitior + 0.7998 79.98%
OATP1B3 inhibitior + 0.9140 91.40%
MATE1 inhibitior - 0.7200 72.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.9790 97.90%
P-glycoprotein inhibitior + 0.8180 81.80%
P-glycoprotein substrate + 0.6877 68.77%
CYP3A4 substrate + 0.7114 71.14%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8492 84.92%
CYP3A4 inhibition - 0.8116 81.16%
CYP2C9 inhibition - 0.5676 56.76%
CYP2C19 inhibition - 0.7464 74.64%
CYP2D6 inhibition - 0.8407 84.07%
CYP1A2 inhibition + 0.5280 52.80%
CYP2C8 inhibition + 0.7121 71.21%
CYP inhibitory promiscuity - 0.6653 66.53%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9125 91.25%
Carcinogenicity (trinary) Non-required 0.4798 47.98%
Eye corrosion - 0.9813 98.13%
Eye irritation - 0.9148 91.48%
Skin irritation - 0.7463 74.63%
Skin corrosion - 0.9111 91.11%
Ames mutagenesis - 0.5808 58.08%
Human Ether-a-go-go-Related Gene inhibition - 0.5829 58.29%
Micronuclear + 0.6700 67.00%
Hepatotoxicity + 0.6023 60.23%
skin sensitisation - 0.8289 82.89%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity + 0.8125 81.25%
Nephrotoxicity - 0.7388 73.88%
Acute Oral Toxicity (c) III 0.5280 52.80%
Estrogen receptor binding + 0.8389 83.89%
Androgen receptor binding + 0.7983 79.83%
Thyroid receptor binding + 0.6287 62.87%
Glucocorticoid receptor binding + 0.7379 73.79%
Aromatase binding + 0.7131 71.31%
PPAR gamma + 0.6966 69.66%
Honey bee toxicity - 0.7259 72.59%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.8465 84.65%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.74% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.04% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 95.46% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.96% 91.11%
CHEMBL2581 P07339 Cathepsin D 93.10% 98.95%
CHEMBL221 P23219 Cyclooxygenase-1 91.91% 90.17%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 87.29% 96.90%
CHEMBL230 P35354 Cyclooxygenase-2 86.58% 89.63%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.49% 96.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 85.73% 91.24%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 85.57% 93.03%
CHEMBL255 P29275 Adenosine A2b receptor 84.90% 98.59%
CHEMBL202 P00374 Dihydrofolate reductase 84.83% 89.92%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 84.17% 85.30%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.85% 99.17%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.11% 100.00%
CHEMBL1937 Q92769 Histone deacetylase 2 82.64% 94.75%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.55% 94.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.77% 99.23%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.53% 91.07%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 80.43% 90.71%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 80.02% 95.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Arabidopsis thaliana
Clausena excavata
Cupressus funebris
Equisetum arvense
Rhinacanthus nasutus

Cross-Links

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PubChem 135407639
LOTUS LTS0021212
wikiData Q104399795