Methyl geranate

Details

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Internal ID 4e009a70-7bc6-4abb-9404-a38752c165b2
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Monoterpenoids > Acyclic monoterpenoids
IUPAC Name methyl (2E)-3,7-dimethylocta-2,6-dienoate
SMILES (Canonical) CC(=CCCC(=CC(=O)OC)C)C
SMILES (Isomeric) CC(=CCC/C(=C/C(=O)OC)/C)C
InChI InChI=1S/C11H18O2/c1-9(2)6-5-7-10(3)8-11(12)13-4/h6,8H,5,7H2,1-4H3/b10-8+
InChI Key ACOBBFVLNKYODD-CSKARUKUSA-N
Popularity 70 references in papers

Physical and Chemical Properties

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Molecular Formula C11H18O2
Molecular Weight 182.26 g/mol
Exact Mass 182.130679813 g/mol
Topological Polar Surface Area (TPSA) 26.30 Ų
XlogP 3.40
Atomic LogP (AlogP) 2.85
H-Bond Acceptor 2
H-Bond Donor 0
Rotatable Bonds 4

Synonyms

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1189-09-9
methyl (2E)-3,7-dimethylocta-2,6-dienoate
E-Methylgeranate
methyl geraniate
2,6-Octadienoic acid, 3,7-dimethyl-, methyl ester, (E)-
Methyl (E)-geranate
2,6-Octadienoic acid, 3,7-dimethyl-, methyl ester
UNII-26YR95MGP2
26YR95MGP2
Geranic acid methyl ester
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Methyl geranate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9934 99.34%
Caco-2 + 0.9068 90.68%
Blood Brain Barrier + 0.9750 97.50%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.4184 41.84%
OATP2B1 inhibitior - 0.8555 85.55%
OATP1B1 inhibitior + 0.9379 93.79%
OATP1B3 inhibitior + 0.8688 86.88%
MATE1 inhibitior - 0.7400 74.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.8987 89.87%
P-glycoprotein inhibitior - 0.9745 97.45%
P-glycoprotein substrate - 0.9425 94.25%
CYP3A4 substrate - 0.5730 57.30%
CYP2C9 substrate + 0.6219 62.19%
CYP2D6 substrate - 0.9080 90.80%
CYP3A4 inhibition - 0.9848 98.48%
CYP2C9 inhibition - 0.9158 91.58%
CYP2C19 inhibition - 0.8972 89.72%
CYP2D6 inhibition - 0.9505 95.05%
CYP1A2 inhibition - 0.8680 86.80%
CYP2C8 inhibition - 0.9711 97.11%
CYP inhibitory promiscuity - 0.8183 81.83%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) + 0.5100 51.00%
Carcinogenicity (trinary) Non-required 0.6025 60.25%
Eye corrosion + 0.6512 65.12%
Eye irritation + 0.8705 87.05%
Skin irritation + 0.8352 83.52%
Skin corrosion - 0.9613 96.13%
Ames mutagenesis - 0.8500 85.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4100 41.00%
Micronuclear - 1.0000 100.00%
Hepatotoxicity - 0.6599 65.99%
skin sensitisation + 0.7546 75.46%
Respiratory toxicity - 0.9000 90.00%
Reproductive toxicity - 0.9778 97.78%
Mitochondrial toxicity - 0.8875 88.75%
Nephrotoxicity + 0.6976 69.76%
Acute Oral Toxicity (c) III 0.7374 73.74%
Estrogen receptor binding - 0.9482 94.82%
Androgen receptor binding - 0.7071 70.71%
Thyroid receptor binding - 0.8993 89.93%
Glucocorticoid receptor binding - 0.8595 85.95%
Aromatase binding - 0.8515 85.15%
PPAR gamma - 0.8864 88.64%
Honey bee toxicity - 0.8138 81.38%
Biodegradation + 0.5250 52.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.9085 90.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 94.52% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.76% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.54% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.24% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.90% 99.17%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 86.61% 94.33%
CHEMBL2581 P07339 Cathepsin D 83.66% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 82.79% 94.73%
CHEMBL221 P23219 Cyclooxygenase-1 81.44% 90.17%
CHEMBL340 P08684 Cytochrome P450 3A4 81.41% 91.19%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 80.91% 89.34%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 80.68% 92.08%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Aloysia citrodora
Baccharis dracunculifolia
Bellis perennis
Citrus medica
Daphne odora
Darwinia citriodora
Humulus lupulus
Leptospermum scoparium
Myrtus communis
Perilla frutescens
Zingiber mioga

Cross-Links

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PubChem 5365910
NPASS NPC226897
LOTUS LTS0181597
wikiData Q27254138