Melatonin

Details

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Internal ID d989b9e6-1ef4-4976-8c40-2d93177eff04
Taxonomy Organoheterocyclic compounds > Indoles and derivatives > Indoles > 3-alkylindoles
IUPAC Name N-[2-(5-methoxy-1H-indol-3-yl)ethyl]acetamide
SMILES (Canonical) CC(=O)NCCC1=CNC2=C1C=C(C=C2)OC
SMILES (Isomeric) CC(=O)NCCC1=CNC2=C1C=C(C=C2)OC
InChI InChI=1S/C13H16N2O2/c1-9(16)14-6-5-10-8-15-13-4-3-11(17-2)7-12(10)13/h3-4,7-8,15H,5-6H2,1-2H3,(H,14,16)
InChI Key DRLFMBDRBRZALE-UHFFFAOYSA-N
Popularity 41,558 references in papers

Physical and Chemical Properties

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Molecular Formula C13H16N2O2
Molecular Weight 232.28 g/mol
Exact Mass 232.121177757 g/mol
Topological Polar Surface Area (TPSA) 54.10 Ų
XlogP 0.80

Synonyms

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73-31-4
Melatonine
N-Acetyl-5-methoxytryptamine
Circadin
N-[2-(5-Methoxy-1H-indol-3-yl)ethyl]acetamide
5-Methoxy-N-acetyltryptamine
Melatol
N-(2-(5-Methoxy-1H-indol-3-yl)ethyl)acetamide
Melovine
Melatonex
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Melatonin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
No predicted properties yet!

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 28183.8 nM
Potency
via CMAUP
CHEMBL3577 P00352 Aldehyde dehydrogenase 1A1 39810.7 nM
Potency
via CMAUP
CHEMBL1293237 P54132 Bloom syndrome protein 1.6 nM
1.6 nM
1.6 nM
Potency
Potency
Potency
via CMAUP
via CMAUP
via Super-PRED
CHEMBL3356 P05177 Cytochrome P450 1A2 5011.87 nM
AC50
via CMAUP
CHEMBL289 P10635 Cytochrome P450 2D6 10000 nM
Potency
via CMAUP
CHEMBL340 P08684 Cytochrome P450 3A4 19952.6 nM
19952.6 nM
Potency
Potency
via CMAUP
via CMAUP
CHEMBL4159 Q99714 Endoplasmic reticulum-associated amyloid beta-peptide-binding protein 39810.7 nM
Potency
via CMAUP
CHEMBL264 Q9Y5N1 Histamine H3 receptor 0.5 nM
Ki
via Super-PRED
CHEMBL1293226 B2RXH2 Lysine-specific demethylase 4D-like 22387.2 nM
Potency
via CMAUP
CHEMBL1945 P48039 Melatonin receptor 1A 0.0257 nM
0.2 nM
0.11 nM
0.6 nM
0.53 nM
0.44 nM
0.18 nM
0.2 nM
EC50
IC50
IC50
IC50
IC50
IC50
IC50
IC50
via Super-PRED
PMID: 18372181
PMID: 26988801
PMID: 12643943
PMID: 23582449
PMID: 23466604
PMID: 18983139
PMID: 21377769
CHEMBL1946 P49286 Melatonin receptor 1B 0.069 nM
0.53 nM
0.53 nM
EC50
IC50
IC50
via Super-PRED
PMID: 18372181
PMID: 21377769
CHEMBL1293235 P02545 Prelamin-A/C 0.8 nM
0.8 nM
Potency
Potency
via CMAUP
via Super-PRED
CHEMBL3959 P16083 Quinone reductase 2 64.6 nM
11300 nM
6600 nM
11300 nM
64.57 nM
64.6 nM
IC50
IC50
IC50
IC50
IC50
IC50
PMID: 21377769
PMID: 19265439
PMID: 23131339
PMID: 23131339
PMID: 18400335
via Super-PRED
CHEMBL1293294 P51151 Ras-related protein Rab-9A 14125.4 nM
Potency
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.49% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.56% 96.09%
CHEMBL255 P29275 Adenosine A2b receptor 96.89% 98.59%
CHEMBL2581 P07339 Cathepsin D 93.38% 98.95%
CHEMBL4208 P20618 Proteasome component C5 92.18% 90.00%
CHEMBL2535 P11166 Glucose transporter 91.12% 98.75%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.95% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.90% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.27% 99.17%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.61% 96.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.52% 95.56%
CHEMBL3437 Q16853 Amine oxidase, copper containing 84.10% 94.00%
CHEMBL2292 Q13627 Dual-specificity tyrosine-phosphorylation regulated kinase 1A 83.41% 93.24%
CHEMBL4225 P49760 Dual specificity protein kinase CLK2 82.04% 80.96%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.79% 92.62%
CHEMBL3155 P34969 Serotonin 7 (5-HT7) receptor 81.30% 90.71%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 80.35% 94.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hypericum perforatum
Ipomoea nil
Juglans regia
Leonurus japonicus
Prunus cerasus
Solanum tuberosum
Zingiber officinale
Ziziphus jujuba

Cross-Links

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PubChem 896
NPASS NPC307963
ChEMBL CHEMBL45
LOTUS LTS0219322
wikiData Q180912