Lucidumoside C

Details

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Internal ID a53b2860-ce37-43ec-a0d0-e3653d9e1fa0
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name methyl (4S,5E,6S)-4-[2-[2-(3,4-dihydroxyphenyl)-2-ethoxyethoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate
SMILES (Canonical) CCOC(COC(=O)CC1C(=COC(C1=CC)OC2C(C(C(C(O2)CO)O)O)O)C(=O)OC)C3=CC(=C(C=C3)O)O
SMILES (Isomeric) CCOC(COC(=O)C[C@@H]\1C(=CO[C@H](/C1=C/C)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)C(=O)OC)C3=CC(=C(C=C3)O)O
InChI InChI=1S/C27H36O14/c1-4-14-15(9-21(31)38-12-20(37-5-2)13-6-7-17(29)18(30)8-13)16(25(35)36-3)11-39-26(14)41-27-24(34)23(33)22(32)19(10-28)40-27/h4,6-8,11,15,19-20,22-24,26-30,32-34H,5,9-10,12H2,1-3H3/b14-4+/t15-,19+,20?,22+,23-,24+,26-,27-/m0/s1
InChI Key RDLNVCALMXCDOJ-QUVQPCEGSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C27H36O14
Molecular Weight 584.60 g/mol
Exact Mass 584.21050582 g/mol
Topological Polar Surface Area (TPSA) 211.00 Ų
XlogP -0.70
Atomic LogP (AlogP) -0.10
H-Bond Acceptor 14
H-Bond Donor 6
Rotatable Bonds 11

Synonyms

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methyl (2S,3E,4S)-4-{2-[2-(3,4-dihydroxyphenyl)-2-ethoxyethoxy]-2-oxoethyl}-3-ethylidene-2-(beta-D-glucopyranosyloxy)-3,4-dihydro-2H-pyran-5-carboxylate
CHEBI:66596
AKOS040763751
Q27135211
methyl (4S,5E,6S)-4-[2-[2-(3,4-dihydroxyphenyl)-2-ethoxyethoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

2D Structure

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2D Structure of Lucidumoside C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5537 55.37%
Caco-2 - 0.8833 88.33%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7008 70.08%
OATP2B1 inhibitior - 0.8674 86.74%
OATP1B1 inhibitior + 0.7709 77.09%
OATP1B3 inhibitior + 0.9424 94.24%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.5701 57.01%
P-glycoprotein inhibitior - 0.4705 47.05%
P-glycoprotein substrate + 0.5744 57.44%
CYP3A4 substrate + 0.6648 66.48%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8763 87.63%
CYP3A4 inhibition - 0.6767 67.67%
CYP2C9 inhibition - 0.7505 75.05%
CYP2C19 inhibition - 0.6484 64.84%
CYP2D6 inhibition - 0.9070 90.70%
CYP1A2 inhibition - 0.8224 82.24%
CYP2C8 inhibition + 0.7009 70.09%
CYP inhibitory promiscuity - 0.7450 74.50%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6479 64.79%
Eye corrosion - 0.9893 98.93%
Eye irritation - 0.9310 93.10%
Skin irritation - 0.8255 82.55%
Skin corrosion - 0.9518 95.18%
Ames mutagenesis + 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4231 42.31%
Micronuclear - 0.6000 60.00%
Hepatotoxicity - 0.7500 75.00%
skin sensitisation - 0.8158 81.58%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity + 0.5375 53.75%
Nephrotoxicity - 0.7062 70.62%
Acute Oral Toxicity (c) III 0.6644 66.44%
Estrogen receptor binding + 0.8291 82.91%
Androgen receptor binding + 0.6603 66.03%
Thyroid receptor binding - 0.5157 51.57%
Glucocorticoid receptor binding + 0.7292 72.92%
Aromatase binding - 0.4906 49.06%
PPAR gamma + 0.6872 68.72%
Honey bee toxicity - 0.7112 71.12%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.9353 93.53%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.42% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.85% 96.09%
CHEMBL1951 P21397 Monoamine oxidase A 96.08% 91.49%
CHEMBL3401 O75469 Pregnane X receptor 94.21% 94.73%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.58% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 92.97% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.56% 86.33%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 91.47% 96.00%
CHEMBL2581 P07339 Cathepsin D 90.43% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.10% 89.00%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 84.78% 95.64%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 84.38% 90.71%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 82.81% 94.80%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 82.43% 96.90%
CHEMBL5255 O00206 Toll-like receptor 4 82.41% 92.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.37% 95.56%
CHEMBL1293316 Q9HBX9 Relaxin receptor 1 80.13% 82.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ligustrum lucidum

Cross-Links

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PubChem 10793430
NPASS NPC149366
LOTUS LTS0063654
wikiData Q27135211