(2S,3R,4S,5R)-2-[[(3S,3aS,4S,5aR,5bR,7S,7aR,9S,11aR,11bR,13aR,13bR)-7-hydroxy-3-(2-hydroxypropan-2-yl)-5a,5b,8,8,11a,13b-hexamethyl-4-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-1,2,3,3a,4,5,6,7,7a,9,10,11,11b,12,13,13a-hexadecahydrocyclopenta[a]chrysen-9-yl]oxy]oxane-3,4,5-triol

Details

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Internal ID 5ccf893f-7d94-41c0-b14e-fae0e004fca1
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Hopanoids
IUPAC Name (2S,3R,4S,5R)-2-[[(3S,3aS,4S,5aR,5bR,7S,7aR,9S,11aR,11bR,13aR,13bR)-7-hydroxy-3-(2-hydroxypropan-2-yl)-5a,5b,8,8,11a,13b-hexamethyl-4-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-1,2,3,3a,4,5,6,7,7a,9,10,11,11b,12,13,13a-hexadecahydrocyclopenta[a]chrysen-9-yl]oxy]oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C40H68O12/c1-35(2)26(52-34-31(47)29(45)22(43)18-50-34)12-14-38(6)25-10-9-24-37(5)13-11-19(36(3,4)48)27(37)23(51-33-30(46)28(44)21(42)17-49-33)16-40(24,8)39(25,7)15-20(41)32(35)38/h19-34,41-48H,9-18H2,1-8H3/t19-,20-,21-,22+,23-,24+,25+,26-,27+,28-,29-,30+,31+,32-,33-,34-,37+,38+,39+,40+/m0/s1
InChI Key PXHQDGIWIMHXGV-VWUMSIECSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C40H68O12
Molecular Weight 741.00 g/mol
Exact Mass 740.47107760 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 2.09
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4S,5R)-2-[[(3S,3aS,4S,5aR,5bR,7S,7aR,9S,11aR,11bR,13aR,13bR)-7-hydroxy-3-(2-hydroxypropan-2-yl)-5a,5b,8,8,11a,13b-hexamethyl-4-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-1,2,3,3a,4,5,6,7,7a,9,10,11,11b,12,13,13a-hexadecahydrocyclopenta[a]chrysen-9-yl]oxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5910 59.10%
Caco-2 - 0.8591 85.91%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.6634 66.34%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8996 89.96%
OATP1B3 inhibitior + 0.9056 90.56%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior - 0.8249 82.49%
P-glycoprotein inhibitior + 0.7430 74.30%
P-glycoprotein substrate - 0.6307 63.07%
CYP3A4 substrate + 0.7100 71.00%
CYP2C9 substrate - 0.7981 79.81%
CYP2D6 substrate - 0.8283 82.83%
CYP3A4 inhibition - 0.9691 96.91%
CYP2C9 inhibition - 0.9021 90.21%
CYP2C19 inhibition - 0.8903 89.03%
CYP2D6 inhibition - 0.9560 95.60%
CYP1A2 inhibition - 0.9021 90.21%
CYP2C8 inhibition + 0.5784 57.84%
CYP inhibitory promiscuity - 0.9822 98.22%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6337 63.37%
Eye corrosion - 0.9901 99.01%
Eye irritation - 0.9055 90.55%
Skin irritation - 0.7062 70.62%
Skin corrosion - 0.9456 94.56%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7143 71.43%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.7375 73.75%
skin sensitisation - 0.9138 91.38%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.8983 89.83%
Acute Oral Toxicity (c) I 0.4989 49.89%
Estrogen receptor binding + 0.5870 58.70%
Androgen receptor binding + 0.7293 72.93%
Thyroid receptor binding - 0.5708 57.08%
Glucocorticoid receptor binding + 0.5497 54.97%
Aromatase binding + 0.6481 64.81%
PPAR gamma + 0.6739 67.39%
Honey bee toxicity - 0.6589 65.89%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.8551 85.51%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.27% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.82% 91.11%
CHEMBL241 Q14432 Phosphodiesterase 3A 93.56% 92.94%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 93.50% 92.88%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.38% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 90.94% 96.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.70% 95.89%
CHEMBL1937 Q92769 Histone deacetylase 2 89.22% 94.75%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.41% 94.45%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 87.13% 96.77%
CHEMBL2581 P07339 Cathepsin D 86.38% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.06% 100.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 86.03% 97.14%
CHEMBL3922 P50579 Methionine aminopeptidase 2 84.96% 97.28%
CHEMBL2179 P04062 Beta-glucocerebrosidase 84.91% 85.31%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.18% 94.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.84% 85.14%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 81.36% 82.69%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.77% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.08% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Glinus lotoides

Cross-Links

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PubChem 102465336
NPASS NPC274305