Longicalycinin A

Details

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Internal ID 7ddf6b42-785c-4271-b018-ba33a54139cb
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Peptides > Oligopeptides
IUPAC Name (3S,6S,12S,15S)-6,12-dibenzyl-3-[(4-hydroxyphenyl)methyl]-1,4,7,10,13-pentazabicyclo[13.3.0]octadecane-2,5,8,11,14-pentone
SMILES (Canonical) C1CC2C(=O)NC(C(=O)NCC(=O)NC(C(=O)NC(C(=O)N2C1)CC3=CC=C(C=C3)O)CC4=CC=CC=C4)CC5=CC=CC=C5
SMILES (Isomeric) C1C[C@H]2C(=O)N[C@H](C(=O)NCC(=O)N[C@H](C(=O)N[C@H](C(=O)N2C1)CC3=CC=C(C=C3)O)CC4=CC=CC=C4)CC5=CC=CC=C5
InChI InChI=1S/C34H37N5O6/c40-25-15-13-24(14-16-25)20-28-34(45)39-17-7-12-29(39)33(44)37-26(18-22-8-3-1-4-9-22)31(42)35-21-30(41)36-27(32(43)38-28)19-23-10-5-2-6-11-23/h1-6,8-11,13-16,26-29,40H,7,12,17-21H2,(H,35,42)(H,36,41)(H,37,44)(H,38,43)/t26-,27-,28-,29-/m0/s1
InChI Key CWNYOXLYNGDTSL-DZUOILHNSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C34H37N5O6
Molecular Weight 611.70 g/mol
Exact Mass 611.27438392 g/mol
Topological Polar Surface Area (TPSA) 157.00 Ų
XlogP 3.00
Atomic LogP (AlogP) 1.00
H-Bond Acceptor 6
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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cyclo(glycyl-L-phenylalanyl-L-tyrosyl-L-prolyl-L-phenylalanyl)
CHEBI:66590
cyclo(Gly(1)-Phe(2)-Tyr(3)-Pro(4)-Phe(5)-)
Q27135205

2D Structure

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2D Structure of Longicalycinin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8062 80.62%
Caco-2 - 0.9145 91.45%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.8026 80.26%
OATP2B1 inhibitior - 0.7223 72.23%
OATP1B1 inhibitior + 0.8690 86.90%
OATP1B3 inhibitior + 0.9426 94.26%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.7314 73.14%
BSEP inhibitior + 0.9725 97.25%
P-glycoprotein inhibitior + 0.8248 82.48%
P-glycoprotein substrate + 0.7373 73.73%
CYP3A4 substrate + 0.5956 59.56%
CYP2C9 substrate - 0.6217 62.17%
CYP2D6 substrate - 0.7361 73.61%
CYP3A4 inhibition - 0.8208 82.08%
CYP2C9 inhibition - 0.8461 84.61%
CYP2C19 inhibition - 0.7280 72.80%
CYP2D6 inhibition - 0.8771 87.71%
CYP1A2 inhibition - 0.9758 97.58%
CYP2C8 inhibition + 0.6229 62.29%
CYP inhibitory promiscuity - 0.9346 93.46%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.8300 83.00%
Carcinogenicity (trinary) Non-required 0.6600 66.00%
Eye corrosion - 0.9938 99.38%
Eye irritation - 0.9502 95.02%
Skin irritation - 0.7746 77.46%
Skin corrosion - 0.9387 93.87%
Ames mutagenesis - 0.7208 72.08%
Human Ether-a-go-go-Related Gene inhibition - 0.3848 38.48%
Micronuclear + 0.8200 82.00%
Hepatotoxicity + 0.5695 56.95%
skin sensitisation - 0.9164 91.64%
Respiratory toxicity + 0.9000 90.00%
Reproductive toxicity + 0.9000 90.00%
Mitochondrial toxicity + 0.9000 90.00%
Nephrotoxicity + 0.4949 49.49%
Acute Oral Toxicity (c) III 0.6688 66.88%
Estrogen receptor binding + 0.6385 63.85%
Androgen receptor binding + 0.6647 66.47%
Thyroid receptor binding - 0.5096 50.96%
Glucocorticoid receptor binding - 0.4819 48.19%
Aromatase binding - 0.6319 63.19%
PPAR gamma + 0.7079 70.79%
Honey bee toxicity - 0.8834 88.34%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.6412 64.12%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 99.27% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.88% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 95.47% 85.14%
CHEMBL2693 Q9UIQ6 Cystinyl aminopeptidase 95.21% 97.64%
CHEMBL3524 P56524 Histone deacetylase 4 94.31% 92.97%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.55% 91.11%
CHEMBL5966 P55899 IgG receptor FcRn large subunit p51 92.85% 90.93%
CHEMBL1902 P62942 FK506-binding protein 1A 92.32% 97.05%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.59% 95.56%
CHEMBL5608 Q16288 NT-3 growth factor receptor 91.38% 95.89%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 91.34% 82.38%
CHEMBL5103 Q969S8 Histone deacetylase 10 90.46% 90.08%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 90.06% 93.00%
CHEMBL4040 P28482 MAP kinase ERK2 88.91% 83.82%
CHEMBL4447 Q9Y337 Kallikrein 5 88.67% 87.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.50% 94.45%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 86.86% 92.67%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 85.72% 91.71%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.88% 97.09%
CHEMBL217 P14416 Dopamine D2 receptor 83.53% 95.62%
CHEMBL3202 P48147 Prolyl endopeptidase 83.30% 90.65%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.26% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dianthus longicalyx
Dianthus superbus

Cross-Links

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PubChem 11319474
NPASS NPC285451
LOTUS LTS0148373
wikiData Q27135205