Litmomycin

Details

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Internal ID 5a3051ae-2df5-4823-91ca-d72aaef8d378
Taxonomy Benzenoids > Anthracenes > Anthraquinones > Hydroxyanthraquinones
IUPAC Name (1R,7S,11S,19S,20R,23R)-5,15,19,23-tetrahydroxy-13,20-dimethyl-8,12,21-trioxahexacyclo[17.2.2.02,18.04,16.06,14.07,11]tricosa-2(18),4,6(14),15-tetraene-3,9,17-trione
SMILES (Canonical) CC1C2=C(C3C(O1)CC(=O)O3)C(=C4C(=C2O)C(=O)C5=C(C4=O)C6CC(C5(C(O6)C)O)O)O
SMILES (Isomeric) C[C@@H]1[C@]2([C@@H](C[C@@H](O1)C3=C2C(=O)C4=C(C5=C([C@H]6[C@H](CC(=O)O6)OC5C)C(=C4C3=O)O)O)O)O
InChI InChI=1S/C22H20O10/c1-5-11-15(21-8(30-5)4-10(24)32-21)19(27)13-14(17(11)25)20(28)16-12(18(13)26)7-3-9(23)22(16,29)6(2)31-7/h5-9,21,23,25,27,29H,3-4H2,1-2H3/t5?,6-,7-,8+,9-,21-,22-/m1/s1
InChI Key ONQCWTVJMHJRFM-NWVAQQJZSA-N
Popularity 44 references in papers

Physical and Chemical Properties

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Molecular Formula C22H20O10
Molecular Weight 444.40 g/mol
Exact Mass 444.10564683 g/mol
Topological Polar Surface Area (TPSA) 160.00 Ų
XlogP -0.40
Atomic LogP (AlogP) 0.50
H-Bond Acceptor 10
H-Bond Donor 4
Rotatable Bonds 0

Synonyms

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Litmomycin
Litomycin
Granaticin A
(1R,7S,11S,19S,20R,23R)-3,17,19,23-tetrahydroxy-13,20-dimethyl-8,12,21-trioxahexacyclo[17.2.2.0(2,18).0(4,16).0(6,14).0(7,11)]tricosa-2(18),3,6(14),16-tetraene-5,9,15-trione
(3aS,8S,9R,13bS,15R)-7,8,12,15-tetrahydroxy-5,9-dimethyl-3,3a,5,8,11,13b-hexahydro-8,11-ethanofuro[3,2-b]pyrano[4',3':6,7]naphtho[2,3-d]pyran-2,6,13(9H)-trione
CHEBI:5533
Q27106795

2D Structure

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2D Structure of Litmomycin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9783 97.83%
Caco-2 - 0.7293 72.93%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.7812 78.12%
OATP2B1 inhibitior - 0.8574 85.74%
OATP1B1 inhibitior + 0.8501 85.01%
OATP1B3 inhibitior + 0.9301 93.01%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.7405 74.05%
P-glycoprotein inhibitior - 0.6987 69.87%
P-glycoprotein substrate - 0.7447 74.47%
CYP3A4 substrate + 0.6249 62.49%
CYP2C9 substrate - 0.5941 59.41%
CYP2D6 substrate - 0.8723 87.23%
CYP3A4 inhibition - 0.7455 74.55%
CYP2C9 inhibition + 0.5000 50.00%
CYP2C19 inhibition - 0.7613 76.13%
CYP2D6 inhibition - 0.8909 89.09%
CYP1A2 inhibition - 0.7712 77.12%
CYP2C8 inhibition - 0.7272 72.72%
CYP inhibitory promiscuity - 0.8787 87.87%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Danger 0.5124 51.24%
Eye corrosion - 0.9878 98.78%
Eye irritation - 0.8581 85.81%
Skin irritation - 0.6247 62.47%
Skin corrosion - 0.8798 87.98%
Ames mutagenesis + 0.6572 65.72%
Human Ether-a-go-go-Related Gene inhibition - 0.6511 65.11%
Micronuclear + 0.6700 67.00%
Hepatotoxicity + 0.5875 58.75%
skin sensitisation - 0.6867 68.67%
Respiratory toxicity + 0.7778 77.78%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity + 0.5868 58.68%
Acute Oral Toxicity (c) I 0.3391 33.91%
Estrogen receptor binding + 0.7454 74.54%
Androgen receptor binding + 0.6401 64.01%
Thyroid receptor binding - 0.6281 62.81%
Glucocorticoid receptor binding + 0.8022 80.22%
Aromatase binding + 0.5384 53.84%
PPAR gamma + 0.7001 70.01%
Honey bee toxicity - 0.8586 85.86%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5600 56.00%
Fish aquatic toxicity + 0.9639 96.39%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL299 P17252 Protein kinase C alpha 96.61% 98.03%
CHEMBL2581 P07339 Cathepsin D 94.34% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.71% 91.11%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 93.00% 99.23%
CHEMBL2996 Q05655 Protein kinase C delta 90.10% 97.79%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.65% 95.56%
CHEMBL3045 P05771 Protein kinase C beta 89.49% 97.63%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.91% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.72% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.33% 89.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.64% 85.14%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 85.38% 85.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.34% 97.25%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 83.03% 82.38%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 82.60% 96.38%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.36% 100.00%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 82.22% 96.00%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 80.86% 93.03%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.51% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Agathis macrophylla
Copaifera paupera
Ruppia maritima
Sciadopitys verticillata
Xylopia aromatica

Cross-Links

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PubChem 441183
LOTUS LTS0229185
wikiData Q104976168