Koumidine

Details

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Internal ID a2283165-af68-4874-ae51-97e963ef9f5f
Taxonomy Alkaloids and derivatives > Macroline alkaloids
IUPAC Name [(1S,12S,13S,14S,15Z)-15-ethylidene-3,17-diazapentacyclo[12.3.1.02,10.04,9.012,17]octadeca-2(10),4,6,8-tetraen-13-yl]methanol
SMILES (Canonical) CC=C1CN2C3CC1C(C2CC4=C3NC5=CC=CC=C45)CO
SMILES (Isomeric) C/C=C/1\CN2[C@H]3C[C@H]1[C@@H]([C@@H]2CC4=C3NC5=CC=CC=C45)CO
InChI InChI=1S/C19H22N2O/c1-2-11-9-21-17-8-14-12-5-3-4-6-16(12)20-19(14)18(21)7-13(11)15(17)10-22/h2-6,13,15,17-18,20,22H,7-10H2,1H3/b11-2+/t13-,15+,17+,18+/m1/s1
InChI Key VXTDUGOBAOLMED-CPEJFPLXSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C19H22N2O
Molecular Weight 294.40 g/mol
Exact Mass 294.173213330 g/mol
Topological Polar Surface Area (TPSA) 39.30 Ų
XlogP 2.10
Atomic LogP (AlogP) 3.02
H-Bond Acceptor 2
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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CHEMBL477697

2D Structure

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2D Structure of Koumidine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9860 98.60%
Caco-2 + 0.8471 84.71%
Blood Brain Barrier + 0.9250 92.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.4687 46.87%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8255 82.55%
OATP1B3 inhibitior + 0.9411 94.11%
MATE1 inhibitior - 0.8618 86.18%
OCT2 inhibitior + 0.6750 67.50%
BSEP inhibitior + 0.6097 60.97%
P-glycoprotein inhibitior - 0.8669 86.69%
P-glycoprotein substrate - 0.5376 53.76%
CYP3A4 substrate + 0.6161 61.61%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.5254 52.54%
CYP3A4 inhibition - 0.8232 82.32%
CYP2C9 inhibition - 0.8453 84.53%
CYP2C19 inhibition - 0.7814 78.14%
CYP2D6 inhibition + 0.5742 57.42%
CYP1A2 inhibition + 0.6374 63.74%
CYP2C8 inhibition + 0.5000 50.00%
CYP inhibitory promiscuity - 0.5686 56.86%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.6885 68.85%
Eye corrosion - 0.9852 98.52%
Eye irritation - 0.9809 98.09%
Skin irritation - 0.7451 74.51%
Skin corrosion - 0.9079 90.79%
Ames mutagenesis + 0.5100 51.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8660 86.60%
Micronuclear + 0.6500 65.00%
Hepatotoxicity - 0.5841 58.41%
skin sensitisation - 0.8435 84.35%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity + 0.5930 59.30%
Acute Oral Toxicity (c) III 0.6897 68.97%
Estrogen receptor binding - 0.5712 57.12%
Androgen receptor binding + 0.6518 65.18%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding - 0.7159 71.59%
Aromatase binding - 0.6959 69.59%
PPAR gamma - 0.5814 58.14%
Honey bee toxicity - 0.9145 91.45%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.9226 92.26%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.72% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.16% 97.09%
CHEMBL2581 P07339 Cathepsin D 93.47% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.75% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.61% 95.56%
CHEMBL253 P34972 Cannabinoid CB2 receptor 89.91% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.75% 94.45%
CHEMBL3310 Q96DB2 Histone deacetylase 11 88.14% 88.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.29% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.22% 89.00%
CHEMBL3192 Q9BY41 Histone deacetylase 8 83.43% 93.99%
CHEMBL228 P31645 Serotonin transporter 82.59% 95.51%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.22% 95.83%
CHEMBL2717 Q9HCR9 Phosphodiesterase 11A 81.31% 85.00%
CHEMBL255 P29275 Adenosine A2b receptor 80.11% 98.59%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gelsemium elegans
Gelsemium sempervirens
Sophora flavescens

Cross-Links

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PubChem 44584550
NPASS NPC275852
LOTUS LTS0008562
wikiData Q105298744