Hypercalin B

Details

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Internal ID f5f828a9-c412-44ba-bf76-6686431a9510
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Monoterpenoids > Aromatic monoterpenoids
IUPAC Name (6E)-5-hydroxy-4-[[(1R,2S,5S)-2-hydroxy-2-methyl-5-prop-1-en-2-ylcyclopentyl]methyl]-6-[hydroxy(phenyl)methylidene]-2,2-bis(3-methylbut-2-enyl)cyclohex-4-ene-1,3-dione
SMILES (Canonical) CC(=CCC1(C(=O)C(=C(C(=C(C2=CC=CC=C2)O)C1=O)O)CC3C(CCC3(C)O)C(=C)C)CC=C(C)C)C
SMILES (Isomeric) CC(=CCC1(C(=O)C(=C(/C(=C(/C2=CC=CC=C2)\O)/C1=O)O)C[C@@H]3[C@H](CC[C@]3(C)O)C(=C)C)CC=C(C)C)C
InChI InChI=1S/C33H42O5/c1-20(2)13-17-33(18-14-21(3)4)30(36)25(19-26-24(22(5)6)15-16-32(26,7)38)29(35)27(31(33)37)28(34)23-11-9-8-10-12-23/h8-14,24,26,34-35,38H,5,15-19H2,1-4,6-7H3/b28-27+/t24-,26-,32+/m1/s1
InChI Key XMVYTWVWYJLUHK-LHHMKPCHSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C33H42O5
Molecular Weight 518.70 g/mol
Exact Mass 518.30322444 g/mol
Topological Polar Surface Area (TPSA) 94.80 Ų
XlogP 7.50
Atomic LogP (AlogP) 7.36
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 8

Synonyms

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125583-45-1
C09941
(6E)-5-hydroxy-4-[[(1R,2S,5S)-2-hydroxy-2-methyl-5-prop-1-en-2-ylcyclopentyl]methyl]-6-[hydroxy(phenyl)methylidene]-2,2-bis(3-methylbut-2-enyl)cyclohex-4-ene-1,3-dione
AC1NQYMS
CHEBI:5833
DTXSID80415133
(6E)-5-hydroxy-4-[[(1R,2S,5S)-2-hydroxy-5-isopropenyl-2-methyl-cyclopentyl]methyl]-6-[hydroxy(phenyl)methylene]-2,2-bis(3-methylbut-2-enyl)cyclohex-4-ene-1,3-dione
2-benzoyl-3,5-dihydroxy-4-[[(1R,2S,5S)-2-hydroxy-5-isopropenyl-2-methyl-cyclopentyl]methyl]-6,6-bis(3-methylbut-2-enyl)cyclohexa-2,4-dien-1-one

2D Structure

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2D Structure of Hypercalin B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9835 98.35%
Caco-2 - 0.7912 79.12%
Blood Brain Barrier + 0.6500 65.00%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.7755 77.55%
OATP2B1 inhibitior - 0.5683 56.83%
OATP1B1 inhibitior + 0.8619 86.19%
OATP1B3 inhibitior + 0.7905 79.05%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7282 72.82%
BSEP inhibitior + 0.9500 95.00%
P-glycoprotein inhibitior + 0.6841 68.41%
P-glycoprotein substrate - 0.5623 56.23%
CYP3A4 substrate + 0.6287 62.87%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8826 88.26%
CYP3A4 inhibition - 0.5920 59.20%
CYP2C9 inhibition - 0.6606 66.06%
CYP2C19 inhibition - 0.6611 66.11%
CYP2D6 inhibition - 0.9239 92.39%
CYP1A2 inhibition - 0.9003 90.03%
CYP2C8 inhibition + 0.7209 72.09%
CYP inhibitory promiscuity - 0.7698 76.98%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.8928 89.28%
Carcinogenicity (trinary) Non-required 0.7082 70.82%
Eye corrosion - 0.9936 99.36%
Eye irritation - 0.8577 85.77%
Skin irritation - 0.5427 54.27%
Skin corrosion - 0.9465 94.65%
Ames mutagenesis - 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3692 36.92%
Micronuclear - 0.8400 84.00%
Hepatotoxicity + 0.5756 57.56%
skin sensitisation - 0.6956 69.56%
Respiratory toxicity + 0.7444 74.44%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity + 0.6475 64.75%
Acute Oral Toxicity (c) I 0.5859 58.59%
Estrogen receptor binding + 0.7677 76.77%
Androgen receptor binding + 0.6602 66.02%
Thyroid receptor binding + 0.5658 56.58%
Glucocorticoid receptor binding + 0.7547 75.47%
Aromatase binding + 0.6909 69.09%
PPAR gamma + 0.7313 73.13%
Honey bee toxicity - 0.8732 87.32%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 98.43% 83.82%
CHEMBL221 P23219 Cyclooxygenase-1 97.86% 90.17%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.47% 91.11%
CHEMBL2581 P07339 Cathepsin D 96.95% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.07% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.13% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 89.54% 99.23%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 86.98% 97.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.21% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 83.72% 97.25%
CHEMBL4072 P07858 Cathepsin B 83.70% 93.67%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 82.71% 94.62%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 82.10% 93.00%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 81.19% 93.03%
CHEMBL1994 P08235 Mineralocorticoid receptor 80.80% 100.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.51% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Hypericum ascyron
Hypericum calycinum

Cross-Links

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PubChem 5281562
LOTUS LTS0273905
wikiData Q104392927