Hydroxymethylserine

Details

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Internal ID 9a6c2a91-e53f-4603-ad6a-b9a912fd5b42
Taxonomy Organic acids and derivatives > Carboxylic acids and derivatives > Amino acids, peptides, and analogues > Alpha amino acids and derivatives > Alpha amino acids > L-alpha-amino acids
IUPAC Name 2-azaniumyl-3-hydroxy-2-(hydroxymethyl)propanoate
SMILES (Canonical) C(C(CO)(C(=O)[O-])[NH3+])O
SMILES (Isomeric) C(C(CO)(C(=O)[O-])[NH3+])O
InChI InChI=1S/C4H9NO4/c5-4(1-6,2-7)3(8)9/h6-7H,1-2,5H2,(H,8,9)
InChI Key ZRPDXDBGEYHEBJ-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C4H9NO4
Molecular Weight 135.12 g/mol
Exact Mass 135.05315777 g/mol
Topological Polar Surface Area (TPSA) 108.00 Ų
XlogP -4.30
Atomic LogP (AlogP) -4.30
H-Bond Acceptor 4
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

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OH-CH3-serine
OH-CH3-SER
CHEMBL3099359
BDBM50444848

2D Structure

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2D Structure of Hydroxymethylserine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4928 49.28%
Caco-2 - 0.7104 71.04%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability + 0.5143 51.43%
Subcellular localzation Lysosomes 0.6802 68.02%
OATP2B1 inhibitior - 0.8547 85.47%
OATP1B1 inhibitior + 0.9515 95.15%
OATP1B3 inhibitior + 0.9158 91.58%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.9222 92.22%
P-glycoprotein inhibitior - 0.9884 98.84%
P-glycoprotein substrate - 0.9834 98.34%
CYP3A4 substrate - 0.7455 74.55%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8268 82.68%
CYP3A4 inhibition - 0.9317 93.17%
CYP2C9 inhibition - 0.9136 91.36%
CYP2C19 inhibition - 0.9027 90.27%
CYP2D6 inhibition - 0.9147 91.47%
CYP1A2 inhibition - 0.8075 80.75%
CYP2C8 inhibition - 0.9847 98.47%
CYP inhibitory promiscuity - 0.9855 98.55%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.8300 83.00%
Carcinogenicity (trinary) Non-required 0.6851 68.51%
Eye corrosion - 0.9819 98.19%
Eye irritation + 0.8619 86.19%
Skin irritation - 0.6319 63.19%
Skin corrosion - 0.9479 94.79%
Ames mutagenesis - 0.6700 67.00%
Human Ether-a-go-go-Related Gene inhibition - 0.8620 86.20%
Micronuclear + 0.5400 54.00%
Hepatotoxicity + 0.6000 60.00%
skin sensitisation - 0.9515 95.15%
Respiratory toxicity - 0.8778 87.78%
Reproductive toxicity - 0.7556 75.56%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity + 0.5705 57.05%
Acute Oral Toxicity (c) III 0.5397 53.97%
Estrogen receptor binding - 0.9502 95.02%
Androgen receptor binding - 0.7752 77.52%
Thyroid receptor binding - 0.8296 82.96%
Glucocorticoid receptor binding - 0.9180 91.80%
Aromatase binding - 0.8778 87.78%
PPAR gamma - 0.7926 79.26%
Honey bee toxicity - 0.9453 94.53%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.7400 74.00%
Fish aquatic toxicity - 0.9274 92.74%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 82.93% 96.09%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 82.63% 91.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Trichosanthes kirilowii

Cross-Links

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PubChem 25201639
NPASS NPC107645