glycocitrine I

Details

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Internal ID d40d3f71-ee9d-4031-b229-e10f204d5133
Taxonomy Organoheterocyclic compounds > Quinolines and derivatives > Benzoquinolines > Acridines > Acridones
IUPAC Name 1,5-dihydroxy-3-methoxy-10-methyl-4-(3-methylbut-2-enyl)acridin-9-one
SMILES (Canonical) CC(=CCC1=C(C=C(C2=C1N(C3=C(C2=O)C=CC=C3O)C)O)OC)C
SMILES (Isomeric) CC(=CCC1=C(C=C(C2=C1N(C3=C(C2=O)C=CC=C3O)C)O)OC)C
InChI InChI=1S/C20H21NO4/c1-11(2)8-9-12-16(25-4)10-15(23)17-19(12)21(3)18-13(20(17)24)6-5-7-14(18)22/h5-8,10,22-23H,9H2,1-4H3
InChI Key ICOVYJLPIYGGGL-UHFFFAOYSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C20H21NO4
Molecular Weight 339.40 g/mol
Exact Mass 339.14705815 g/mol
Topological Polar Surface Area (TPSA) 70.00 Ų
XlogP 4.90
Atomic LogP (AlogP) 3.62
H-Bond Acceptor 5
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

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82354-36-7
1,5-dihydroxy-3-methoxy-10-methyl-4-(3-methylbut-2-enyl)acridin-9-one
1,5-Dihydroxy-3-methoxy-10-methyl-4-(3-methyl-2-butenyl)acridin-9(10H)-one
CHEMBL508186
AKOS040763207

2D Structure

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2D Structure of glycocitrine I

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9410 94.10%
Caco-2 + 0.9325 93.25%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability + 0.6571 65.71%
Subcellular localzation Nucleus 0.4813 48.13%
OATP2B1 inhibitior - 0.7214 72.14%
OATP1B1 inhibitior + 0.9108 91.08%
OATP1B3 inhibitior + 0.9289 92.89%
MATE1 inhibitior - 0.6800 68.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.6223 62.23%
P-glycoprotein inhibitior - 0.6383 63.83%
P-glycoprotein substrate - 0.6027 60.27%
CYP3A4 substrate + 0.6035 60.35%
CYP2C9 substrate - 0.6000 60.00%
CYP2D6 substrate - 0.8372 83.72%
CYP3A4 inhibition - 0.7288 72.88%
CYP2C9 inhibition - 0.6842 68.42%
CYP2C19 inhibition + 0.5344 53.44%
CYP2D6 inhibition - 0.5325 53.25%
CYP1A2 inhibition + 0.7017 70.17%
CYP2C8 inhibition - 0.7078 70.78%
CYP inhibitory promiscuity + 0.8094 80.94%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.4835 48.35%
Eye corrosion - 0.9915 99.15%
Eye irritation + 0.5320 53.20%
Skin irritation - 0.8365 83.65%
Skin corrosion - 0.9516 95.16%
Ames mutagenesis + 0.6600 66.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4516 45.16%
Micronuclear + 0.5900 59.00%
Hepatotoxicity + 0.5765 57.65%
skin sensitisation - 0.8773 87.73%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.7333 73.33%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.8573 85.73%
Acute Oral Toxicity (c) III 0.6925 69.25%
Estrogen receptor binding + 0.7509 75.09%
Androgen receptor binding - 0.5000 50.00%
Thyroid receptor binding + 0.6446 64.46%
Glucocorticoid receptor binding + 0.7918 79.18%
Aromatase binding + 0.5343 53.43%
PPAR gamma + 0.8466 84.66%
Honey bee toxicity - 0.8564 85.64%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9238 92.38%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 98.51% 98.95%
CHEMBL3192 Q9BY41 Histone deacetylase 8 98.40% 93.99%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.50% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.56% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.16% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.93% 85.14%
CHEMBL1293249 Q13887 Kruppel-like factor 5 94.68% 86.33%
CHEMBL1937 Q92769 Histone deacetylase 2 93.31% 94.75%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.51% 89.00%
CHEMBL2535 P11166 Glucose transporter 90.97% 98.75%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.64% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.70% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 87.66% 94.73%
CHEMBL1951 P21397 Monoamine oxidase A 85.20% 91.49%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 85.02% 96.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.72% 99.17%
CHEMBL1929 P47989 Xanthine dehydrogenase 83.56% 96.12%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.43% 95.89%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 80.63% 89.62%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 80.48% 95.50%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 80.25% 97.21%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Atalantia buxifolia
Citrus × aurantium
Citrus maxima
Glycosmis parviflora

Cross-Links

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PubChem 11724762
NPASS NPC212123
LOTUS LTS0114432
wikiData Q104396587