Glybomine B

Details

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Internal ID 24b9984a-7447-4c25-982f-941a0490cd89
Taxonomy Organoheterocyclic compounds > Indoles and derivatives > Carbazoles
IUPAC Name 6-methoxy-3-methyl-5-(3-methylbut-2-enyl)-9H-carbazol-2-ol
SMILES (Canonical) CC1=CC2=C(C=C1O)NC3=C2C(=C(C=C3)OC)CC=C(C)C
SMILES (Isomeric) CC1=CC2=C(C=C1O)NC3=C2C(=C(C=C3)OC)CC=C(C)C
InChI InChI=1S/C19H21NO2/c1-11(2)5-6-13-18(22-4)8-7-15-19(13)14-9-12(3)17(21)10-16(14)20-15/h5,7-10,20-21H,6H2,1-4H3
InChI Key IYAPESHZKSLHCA-UHFFFAOYSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C19H21NO2
Molecular Weight 295.40 g/mol
Exact Mass 295.157228913 g/mol
Topological Polar Surface Area (TPSA) 45.20 Ų
XlogP 5.30
Atomic LogP (AlogP) 4.85
H-Bond Acceptor 2
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

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CHEMBL459130
6-methoxy-3-methyl-5-(3-methylbut-2-enyl)-9H-carbazol-2-ol

2D Structure

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2D Structure of Glybomine B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9949 99.49%
Caco-2 + 0.5909 59.09%
Blood Brain Barrier + 0.8250 82.50%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.5278 52.78%
OATP2B1 inhibitior - 0.7106 71.06%
OATP1B1 inhibitior + 0.8780 87.80%
OATP1B3 inhibitior + 0.9376 93.76%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior + 0.7728 77.28%
P-glycoprotein inhibitior - 0.8178 81.78%
P-glycoprotein substrate - 0.6957 69.57%
CYP3A4 substrate + 0.5312 53.12%
CYP2C9 substrate - 0.8086 80.86%
CYP2D6 substrate - 0.6644 66.44%
CYP3A4 inhibition + 0.8514 85.14%
CYP2C9 inhibition + 0.7137 71.37%
CYP2C19 inhibition + 0.8344 83.44%
CYP2D6 inhibition + 0.5325 53.25%
CYP1A2 inhibition + 0.8853 88.53%
CYP2C8 inhibition + 0.6501 65.01%
CYP inhibitory promiscuity + 0.9849 98.49%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.4425 44.25%
Eye corrosion - 0.9918 99.18%
Eye irritation + 0.7649 76.49%
Skin irritation - 0.8226 82.26%
Skin corrosion - 0.9238 92.38%
Ames mutagenesis + 0.5046 50.46%
Human Ether-a-go-go-Related Gene inhibition - 0.4904 49.04%
Micronuclear + 0.5959 59.59%
Hepatotoxicity + 0.6681 66.81%
skin sensitisation - 0.8033 80.33%
Respiratory toxicity - 0.5667 56.67%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity - 0.8709 87.09%
Acute Oral Toxicity (c) III 0.6269 62.69%
Estrogen receptor binding + 0.9144 91.44%
Androgen receptor binding + 0.7433 74.33%
Thyroid receptor binding + 0.8632 86.32%
Glucocorticoid receptor binding + 0.8647 86.47%
Aromatase binding + 0.8212 82.12%
PPAR gamma + 0.8715 87.15%
Honey bee toxicity - 0.8940 89.40%
Biodegradation - 0.9500 95.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9452 94.52%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.72% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.62% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 94.53% 91.49%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 93.62% 89.62%
CHEMBL2535 P11166 Glucose transporter 92.68% 98.75%
CHEMBL1937 Q92769 Histone deacetylase 2 92.21% 94.75%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 91.64% 91.71%
CHEMBL3192 Q9BY41 Histone deacetylase 8 90.07% 93.99%
CHEMBL1255126 O15151 Protein Mdm4 89.02% 90.20%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.46% 95.56%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 88.29% 97.21%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.11% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.73% 86.33%
CHEMBL2581 P07339 Cathepsin D 87.17% 98.95%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 86.17% 96.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 86.03% 96.09%
CHEMBL213 P08588 Beta-1 adrenergic receptor 85.00% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.93% 99.17%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.92% 85.14%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.70% 86.92%
CHEMBL2041 P07949 Tyrosine-protein kinase receptor RET 84.54% 91.79%
CHEMBL3401 O75469 Pregnane X receptor 83.54% 94.73%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.28% 92.94%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.21% 96.95%
CHEMBL255 P29275 Adenosine A2b receptor 80.23% 98.59%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Glycosmis lanceolata
Glycosmis pentaphylla

Cross-Links

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PubChem 11208660
NPASS NPC193777
LOTUS LTS0093411
wikiData Q105122610