GlochidionionosideC

Details

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Internal ID 06c50865-d987-4ce8-a6ba-4fb53523fa0f
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (4R)-4-[(E,3S)-3-hydroxybut-1-enyl]-5,5-dimethyl-3-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]cyclohex-2-en-1-one
SMILES (Canonical) CC(C=CC1C(=CC(=O)CC1(C)C)COC2C(C(C(C(O2)CO)O)O)O)O
SMILES (Isomeric) C[C@@H](/C=C/[C@H]1C(=CC(=O)CC1(C)C)CO[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O
InChI InChI=1S/C19H30O8/c1-10(21)4-5-13-11(6-12(22)7-19(13,2)3)9-26-18-17(25)16(24)15(23)14(8-20)27-18/h4-6,10,13-18,20-21,23-25H,7-9H2,1-3H3/b5-4+/t10-,13-,14+,15+,16-,17+,18+/m0/s1
InChI Key CIEXYBWLSDBXKL-DSFNCLLUSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C19H30O8
Molecular Weight 386.40 g/mol
Exact Mass 386.19406791 g/mol
Topological Polar Surface Area (TPSA) 137.00 Ų
XlogP -1.20
Atomic LogP (AlogP) -0.72
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 6

Synonyms

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(4R)-4-[(E,3S)-3-hydroxybut-1-enyl]-5,5-dimethyl-3-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]cyclohex-2-en-1-one

2D Structure

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2D Structure of GlochidionionosideC

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5988 59.88%
Caco-2 - 0.7829 78.29%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.8581 85.81%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8781 87.81%
OATP1B3 inhibitior + 0.8631 86.31%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.6192 61.92%
P-glycoprotein inhibitior - 0.8369 83.69%
P-glycoprotein substrate - 0.8305 83.05%
CYP3A4 substrate + 0.6121 61.21%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8875 88.75%
CYP3A4 inhibition - 0.9602 96.02%
CYP2C9 inhibition - 0.7760 77.60%
CYP2C19 inhibition - 0.8011 80.11%
CYP2D6 inhibition - 0.9330 93.30%
CYP1A2 inhibition - 0.8553 85.53%
CYP2C8 inhibition - 0.8004 80.04%
CYP inhibitory promiscuity - 0.8493 84.93%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6669 66.69%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9763 97.63%
Skin irritation - 0.8185 81.85%
Skin corrosion - 0.9634 96.34%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5529 55.29%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.7146 71.46%
skin sensitisation - 0.8042 80.42%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.6556 65.56%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity + 0.5288 52.88%
Acute Oral Toxicity (c) III 0.6741 67.41%
Estrogen receptor binding + 0.5468 54.68%
Androgen receptor binding - 0.4884 48.84%
Thyroid receptor binding + 0.5172 51.72%
Glucocorticoid receptor binding + 0.6392 63.92%
Aromatase binding - 0.6872 68.72%
PPAR gamma - 0.5281 52.81%
Honey bee toxicity - 0.7896 78.96%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.8300 83.00%
Fish aquatic toxicity + 0.8748 87.48%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.12% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.22% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.72% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.73% 85.14%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.00% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.73% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.56% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.38% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.12% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.89% 100.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.45% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.36% 95.89%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.66% 86.33%
CHEMBL218 P21554 Cannabinoid CB1 receptor 82.53% 96.61%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 80.46% 96.21%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Apocynum venetum
Glochidion zeylanicum

Cross-Links

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PubChem 11025480
NPASS NPC124083
LOTUS LTS0173581
wikiData Q104959677