Glochidioboside

Details

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Internal ID 9e173e50-583a-4a55-a8c9-b4bbd2b4e8c8
Taxonomy Phenylpropanoids and polyketides > 2-arylbenzofuran flavonoids
IUPAC Name (2R,3R,4S,5S,6R)-2-[3-[(2S,3R)-2-(4-hydroxy-3-methoxyphenyl)-3-(hydroxymethyl)-7-methoxy-2,3-dihydro-1-benzofuran-5-yl]propoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) COC1=CC(=CC2=C1OC(C2CO)C3=CC(=C(C=C3)O)OC)CCCOC4C(C(C(C(O4)CO)O)O)O
SMILES (Isomeric) COC1=CC(=CC2=C1O[C@@H]([C@H]2CO)C3=CC(=C(C=C3)O)OC)CCCO[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O
InChI InChI=1S/C26H34O11/c1-33-18-10-14(5-6-17(18)29)24-16(11-27)15-8-13(9-19(34-2)25(15)37-24)4-3-7-35-26-23(32)22(31)21(30)20(12-28)36-26/h5-6,8-10,16,20-24,26-32H,3-4,7,11-12H2,1-2H3/t16-,20+,21+,22-,23+,24+,26+/m0/s1
InChI Key DVWKMCPPEMUHBE-KUCLMONLSA-N
Popularity 8 references in papers

Physical and Chemical Properties

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Molecular Formula C26H34O11
Molecular Weight 522.50 g/mol
Exact Mass 522.21011190 g/mol
Topological Polar Surface Area (TPSA) 168.00 Ų
XlogP 0.50
Atomic LogP (AlogP) 0.37
H-Bond Acceptor 11
H-Bond Donor 6
Rotatable Bonds 10

Synonyms

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MLS000563028
CHEMBL1704274
GZL-B-4451
HMS2268A12
SMR001215804
(2R,3R,4S,5S,6R)-2-[3-[(2S,3R)-2-(4-hydroxy-3-methoxyphenyl)-3-(hydroxymethyl)-7-methoxy-2,3-dihydro-1-benzofuran-5-yl]propoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

2D Structure

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2D Structure of Glochidioboside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5237 52.37%
Caco-2 - 0.8287 82.87%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.7379 73.79%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7983 79.83%
OATP1B3 inhibitior + 0.9647 96.47%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.4680 46.80%
P-glycoprotein inhibitior - 0.5593 55.93%
P-glycoprotein substrate - 0.6162 61.62%
CYP3A4 substrate + 0.6595 65.95%
CYP2C9 substrate - 0.8002 80.02%
CYP2D6 substrate - 0.7492 74.92%
CYP3A4 inhibition - 0.9093 90.93%
CYP2C9 inhibition - 0.7429 74.29%
CYP2C19 inhibition - 0.7576 75.76%
CYP2D6 inhibition - 0.8822 88.22%
CYP1A2 inhibition - 0.7811 78.11%
CYP2C8 inhibition + 0.8077 80.77%
CYP inhibitory promiscuity + 0.5160 51.60%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5834 58.34%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9426 94.26%
Skin irritation - 0.8320 83.20%
Skin corrosion - 0.9493 94.93%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8420 84.20%
Micronuclear - 0.5041 50.41%
Hepatotoxicity - 0.8250 82.50%
skin sensitisation - 0.8971 89.71%
Respiratory toxicity - 0.5778 57.78%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity + 0.6875 68.75%
Nephrotoxicity - 0.7388 73.88%
Acute Oral Toxicity (c) III 0.7295 72.95%
Estrogen receptor binding + 0.7948 79.48%
Androgen receptor binding + 0.5895 58.95%
Thyroid receptor binding + 0.6215 62.15%
Glucocorticoid receptor binding + 0.6175 61.75%
Aromatase binding - 0.4854 48.54%
PPAR gamma + 0.5596 55.96%
Honey bee toxicity - 0.8155 81.55%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity - 0.3984 39.84%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.02% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.84% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.90% 85.14%
CHEMBL3060 Q9Y345 Glycine transporter 2 93.04% 99.17%
CHEMBL2581 P07339 Cathepsin D 92.86% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.53% 86.33%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 90.09% 86.92%
CHEMBL3401 O75469 Pregnane X receptor 89.54% 94.73%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.25% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.03% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.39% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.55% 97.09%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.04% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.31% 94.45%
CHEMBL3194 P02766 Transthyretin 80.93% 90.71%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Afrocarpus gracilior
Glochidion zeylanicum
Litsea glutinosa

Cross-Links

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PubChem 24982202
LOTUS LTS0073644
wikiData Q104990393