Githagosid

Details

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Internal ID c8c08ac7-5eca-429b-8d3f-4cfc6f152cfa
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (4aS,6aR,6aS,6bR,8aR,9S,10S,12aR,14bS)-10-[4,5-dihydroxy-3-[3-hydroxy-6-methyl-4-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5-(3,4,5-trihydroxyoxan-2-yl)oxyoxan-2-yl]oxy-6-methyloxan-2-yl]oxy-9-formyl-2,2,6a,6b,9,12a-hexamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid
SMILES (Canonical) CC1C(C(C(C(O1)OC2CCC3(C(C2(C)C=O)CCC4(C3CC=C5C4(CCC6(C5CC(CC6)(C)C)C(=O)O)C)C)C)OC7C(C(C(C(O7)C)OC8C(C(C(CO8)O)O)O)OC9C(C(C(C(O9)CO)O)O)O)O)O)O
SMILES (Isomeric) CC1C(C(C(C(O1)O[C@H]2CC[C@]3([C@H]([C@]2(C)C=O)CC[C@@]4([C@@H]3CC=C5[C@]4(CC[C@@]6([C@H]5CC(CC6)(C)C)C(=O)O)C)C)C)OC7C(C(C(C(O7)C)OC8C(C(C(CO8)O)O)O)OC9C(C(C(C(O9)CO)O)O)O)O)O)O
InChI InChI=1S/C53H84O21/c1-23-32(57)36(61)42(74-45-39(64)41(73-44-38(63)35(60)34(59)28(20-54)70-44)40(24(2)69-45)72-43-37(62)33(58)27(56)21-67-43)46(68-23)71-31-12-13-49(5)29(50(31,6)22-55)11-14-52(8)30(49)10-9-25-26-19-48(3,4)15-17-53(26,47(65)66)18-16-51(25,52)7/h9,22-24,26-46,54,56-64H,10-21H2,1-8H3,(H,65,66)/t23?,24?,26-,27?,28?,29+,30+,31-,32?,33?,34?,35?,36?,37?,38?,39?,40?,41?,42?,43?,44?,45?,46?,49-,50-,51+,52+,53-/m0/s1
InChI Key KSCTXYWWXSLZNR-JYJIIUGKSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C53H84O21
Molecular Weight 1057.20 g/mol
Exact Mass 1056.55050968 g/mol
Topological Polar Surface Area (TPSA) 331.00 Ų
XlogP 0.80
Atomic LogP (AlogP) 0.40
H-Bond Acceptor 20
H-Bond Donor 11
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of Githagosid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7601 76.01%
Caco-2 - 0.8784 87.84%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.8703 87.03%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7284 72.84%
OATP1B3 inhibitior - 0.4610 46.10%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5026 50.26%
BSEP inhibitior + 0.9396 93.96%
P-glycoprotein inhibitior + 0.7468 74.68%
P-glycoprotein substrate - 0.5636 56.36%
CYP3A4 substrate + 0.7294 72.94%
CYP2C9 substrate - 0.8127 81.27%
CYP2D6 substrate - 0.8768 87.68%
CYP3A4 inhibition - 0.8310 83.10%
CYP2C9 inhibition - 0.8704 87.04%
CYP2C19 inhibition - 0.9216 92.16%
CYP2D6 inhibition - 0.9491 94.91%
CYP1A2 inhibition - 0.9009 90.09%
CYP2C8 inhibition + 0.7225 72.25%
CYP inhibitory promiscuity - 0.9733 97.33%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6024 60.24%
Eye corrosion - 0.9896 98.96%
Eye irritation - 0.9022 90.22%
Skin irritation - 0.5876 58.76%
Skin corrosion - 0.9441 94.41%
Ames mutagenesis - 0.6270 62.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7648 76.48%
Micronuclear - 0.7800 78.00%
Hepatotoxicity - 0.9000 90.00%
skin sensitisation - 0.9013 90.13%
Respiratory toxicity - 0.5444 54.44%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity - 0.6250 62.50%
Nephrotoxicity - 0.9304 93.04%
Acute Oral Toxicity (c) III 0.8023 80.23%
Estrogen receptor binding + 0.8124 81.24%
Androgen receptor binding + 0.7420 74.20%
Thyroid receptor binding + 0.5331 53.31%
Glucocorticoid receptor binding + 0.7421 74.21%
Aromatase binding + 0.6442 64.42%
PPAR gamma + 0.8078 80.78%
Honey bee toxicity - 0.6802 68.02%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6455 64.55%
Fish aquatic toxicity + 0.9585 95.85%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.04% 91.11%
CHEMBL3714130 P46095 G-protein coupled receptor 6 94.53% 97.36%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.44% 96.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.32% 95.56%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.86% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.46% 97.09%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.44% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.35% 94.45%
CHEMBL2581 P07339 Cathepsin D 87.14% 98.95%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 87.01% 95.17%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 86.27% 96.77%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 83.46% 93.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.44% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.29% 95.50%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.24% 99.17%
CHEMBL226 P30542 Adenosine A1 receptor 81.55% 95.93%
CHEMBL5028 O14672 ADAM10 80.71% 97.50%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Agrostemma githago

Cross-Links

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PubChem 139595813
LOTUS LTS0044048
wikiData Q105145350