Gingerglycolipid A

Details

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Internal ID d7969536-3848-4236-aa86-9d39d1cd1352
Taxonomy Lipids and lipid-like molecules > Glycerolipids > Glycosylglycerols > Glycosylmonoacylglycerols
IUPAC Name [(2S)-2-hydroxy-3-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-[[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxypropyl] (9Z,12Z,15Z)-octadeca-9,12,15-trienoate
SMILES (Canonical) CCC=CCC=CCC=CCCCCCCCC(=O)OCC(COC1C(C(C(C(O1)COC2C(C(C(C(O2)CO)O)O)O)O)O)O)O
SMILES (Isomeric) CC/C=C\C/C=C\C/C=C\CCCCCCCC(=O)OC[C@H](CO[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO[C@@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)O)O)O)O
InChI InChI=1S/C33H56O14/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-25(36)43-19-22(35)20-44-32-31(42)29(40)27(38)24(47-32)21-45-33-30(41)28(39)26(37)23(18-34)46-33/h3-4,6-7,9-10,22-24,26-35,37-42H,2,5,8,11-21H2,1H3/b4-3-,7-6-,10-9-/t22-,23-,24-,26+,27+,28+,29+,30-,31-,32-,33+/m1/s1
InChI Key MPSGDHOYFIUPSO-MDAKJLGTSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C33H56O14
Molecular Weight 676.80 g/mol
Exact Mass 676.36700646 g/mol
Topological Polar Surface Area (TPSA) 225.00 Ų
XlogP 1.20
Atomic LogP (AlogP) 0.12
H-Bond Acceptor 14
H-Bond Donor 8
Rotatable Bonds 22

Synonyms

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145937-22-0
[(2S)-2-Hydroxy-3-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-[[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxypropyl] (9Z,12Z,15Z)-octadeca-9,12,15-trienoate
CHEBI:168185
DTXSID901316174
HY-N8145
AKOS040756836
CS-0140200

2D Structure

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2D Structure of Gingerglycolipid A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7701 77.01%
Caco-2 - 0.8698 86.98%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.8537 85.37%
OATP2B1 inhibitior - 0.7199 71.99%
OATP1B1 inhibitior + 0.7594 75.94%
OATP1B3 inhibitior + 0.9162 91.62%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.8653 86.53%
P-glycoprotein inhibitior + 0.6292 62.92%
P-glycoprotein substrate - 0.7397 73.97%
CYP3A4 substrate + 0.6152 61.52%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8842 88.42%
CYP3A4 inhibition - 0.9154 91.54%
CYP2C9 inhibition - 0.9333 93.33%
CYP2C19 inhibition - 0.8606 86.06%
CYP2D6 inhibition - 0.9170 91.70%
CYP1A2 inhibition - 0.9136 91.36%
CYP2C8 inhibition - 0.6568 65.68%
CYP inhibitory promiscuity - 0.9417 94.17%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.7309 73.09%
Eye corrosion - 0.9921 99.21%
Eye irritation - 0.9148 91.48%
Skin irritation - 0.8066 80.66%
Skin corrosion - 0.9618 96.18%
Ames mutagenesis - 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7968 79.68%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.7699 76.99%
skin sensitisation - 0.9097 90.97%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity - 0.5889 58.89%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.9180 91.80%
Acute Oral Toxicity (c) III 0.6198 61.98%
Estrogen receptor binding + 0.8138 81.38%
Androgen receptor binding - 0.6836 68.36%
Thyroid receptor binding - 0.5773 57.73%
Glucocorticoid receptor binding - 0.5792 57.92%
Aromatase binding + 0.5992 59.92%
PPAR gamma + 0.6201 62.01%
Honey bee toxicity - 0.8417 84.17%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6345 63.45%
Fish aquatic toxicity + 0.6462 64.62%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.64% 96.09%
CHEMBL3060 Q9Y345 Glycine transporter 2 98.55% 99.17%
CHEMBL2581 P07339 Cathepsin D 94.81% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.07% 91.11%
CHEMBL5255 O00206 Toll-like receptor 4 90.95% 92.50%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 90.15% 96.00%
CHEMBL2265 P23141 Acyl coenzyme A:cholesterol acyltransferase 86.68% 85.94%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 86.64% 97.29%
CHEMBL220 P22303 Acetylcholinesterase 86.45% 94.45%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 84.41% 94.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.05% 97.09%
CHEMBL2072 P35499 Sodium channel protein type IV alpha subunit 83.93% 92.32%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 83.59% 96.47%
CHEMBL3401 O75469 Pregnane X receptor 83.56% 94.73%
CHEMBL4227 P25090 Lipoxin A4 receptor 83.20% 100.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.66% 89.00%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.23% 96.95%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.74% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.57% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Guapira graciliflora
Sonchus arvensis
Zingiber officinale

Cross-Links

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PubChem 10349562
LOTUS LTS0011050
wikiData Q105169706