Gibberellin A6

Details

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Internal ID 5877631d-7268-4094-80fa-cf1b7671c021
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > C19-gibberellins > C19-gibberellin 6-carboxylic acids
IUPAC Name (1R,2R,5S,8S,9S,10R,11S,12R,14S)-5-hydroxy-11-methyl-6-methylidene-17-oxo-13,16-dioxahexacyclo[9.4.2.15,8.01,10.02,8.012,14]octadecane-9-carboxylic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C19H22O6/c1-8-5-17-7-18(8,23)4-3-10(17)19-6-9-13(24-9)16(2,15(22)25-19)12(19)11(17)14(20)21/h9-13,23H,1,3-7H2,2H3,(H,20,21)/t9-,10+,11+,12+,13-,16-,17-,18-,19+/m0/s1
InChI Key XNBWKKYPKJHUKD-UQJCXHNCSA-N
Popularity 13 references in papers

Physical and Chemical Properties

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Molecular Formula C19H22O6
Molecular Weight 346.40 g/mol
Exact Mass 346.14163842 g/mol
Topological Polar Surface Area (TPSA) 96.40 Ų
XlogP 0.20
Atomic LogP (AlogP) 1.27
H-Bond Acceptor 5
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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Gibberellin A6
(1R,2R,5S,8S,9S,10R,11S,12R,14S)-5-Hydroxy-11-methyl-6-methylidene-17-oxo-13,16-dioxahexacyclo[9.4.2.15,8.01,10.02,8.012,14]octadecane-9-carboxylic acid
2beta,3beta-Epoxy-4aalpha,7-dihydroxy-1beta-methyl-8-methylenegibbane-1alpha,10beta-dicarboxylic acid 1,4a-lactone
SCHEMBL22582345
CHEBI:29602
GA6
Q27110170
ent-2alpha,3alpha-epoxy-13-hydroxy-20-norgibberell-16-en-19-oic acid 19,10-lactone
(1R,2R,5S,8S,9S,10R,11S,12R,14S)-5-hydroxy-11-methyl-6-methylidene-17-oxo-13,16-dioxahexacyclo[9.4.2.1(5,8).0(1,10).0(2,8).0(12,14)]octadecane-9-carboxylic acid
2beta,3beta-epoxy-7alpha-hydroxy-1beta-methyl-8-methylidene-13-oxo-4a,1alpha-epoxymethano-4aalpha,4bbeta-gibbane-10beta-carboxylic acid

2D Structure

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2D Structure of Gibberellin A6

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9692 96.92%
Caco-2 - 0.5582 55.82%
Blood Brain Barrier + 0.6250 62.50%
Human oral bioavailability + 0.6000 60.00%
Subcellular localzation Mitochondria 0.7936 79.36%
OATP2B1 inhibitior - 0.8579 85.79%
OATP1B1 inhibitior + 0.9177 91.77%
OATP1B3 inhibitior + 0.9417 94.17%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.6842 68.42%
BSEP inhibitior - 0.9659 96.59%
P-glycoprotein inhibitior - 0.8573 85.73%
P-glycoprotein substrate - 0.7467 74.67%
CYP3A4 substrate + 0.6497 64.97%
CYP2C9 substrate - 0.7965 79.65%
CYP2D6 substrate - 0.8660 86.60%
CYP3A4 inhibition - 0.7378 73.78%
CYP2C9 inhibition - 0.8604 86.04%
CYP2C19 inhibition - 0.8854 88.54%
CYP2D6 inhibition - 0.9400 94.00%
CYP1A2 inhibition - 0.8204 82.04%
CYP2C8 inhibition - 0.6937 69.37%
CYP inhibitory promiscuity - 0.9533 95.33%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Danger 0.4257 42.57%
Eye corrosion - 0.9835 98.35%
Eye irritation - 0.9520 95.20%
Skin irritation - 0.5957 59.57%
Skin corrosion - 0.8886 88.86%
Ames mutagenesis - 0.7600 76.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5939 59.39%
Micronuclear - 0.6300 63.00%
Hepatotoxicity + 0.5658 56.58%
skin sensitisation - 0.7640 76.40%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.9000 90.00%
Nephrotoxicity + 0.7357 73.57%
Acute Oral Toxicity (c) IV 0.3924 39.24%
Estrogen receptor binding + 0.8664 86.64%
Androgen receptor binding + 0.5602 56.02%
Thyroid receptor binding + 0.5822 58.22%
Glucocorticoid receptor binding + 0.7741 77.41%
Aromatase binding + 0.7448 74.48%
PPAR gamma + 0.5515 55.15%
Honey bee toxicity - 0.9636 96.36%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6500 65.00%
Fish aquatic toxicity + 0.9810 98.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.72% 94.45%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 90.85% 96.38%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.55% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 90.33% 85.14%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 88.71% 93.04%
CHEMBL3137262 O60341 LSD1/CoREST complex 88.09% 97.09%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 87.82% 93.03%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 86.95% 96.21%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 86.61% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 84.76% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.31% 97.25%
CHEMBL1806 P11388 DNA topoisomerase II alpha 84.04% 89.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.53% 99.23%
CHEMBL2581 P07339 Cathepsin D 83.53% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 82.85% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 82.39% 95.50%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 81.65% 93.00%
CHEMBL4208 P20618 Proteasome component C5 80.23% 90.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Phaseolus coccineus
Phaseolus vulgaris

Cross-Links

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PubChem 12310161
LOTUS LTS0244919
wikiData Q27110170