gibberellin A20(1-)

Details

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Internal ID fb0dc40b-fbfc-468c-b5cd-802c5d4fd049
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > C19-gibberellins > C19-gibberellin 6-carboxylic acids
IUPAC Name (1R,2R,5S,8S,9S,10R,11R)-5-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylate
SMILES (Canonical) CC12CCCC3(C1C(C45C3CCC(C4)(C(=C)C5)O)C(=O)[O-])OC2=O
SMILES (Isomeric) C[C@@]12CCC[C@@]3([C@@H]1[C@@H]([C@]45[C@H]3CC[C@](C4)(C(=C)C5)O)C(=O)[O-])OC2=O
InChI InChI=1S/C19H24O5/c1-10-8-17-9-18(10,23)7-4-11(17)19-6-3-5-16(2,15(22)24-19)13(19)12(17)14(20)21/h11-13,23H,1,3-9H2,2H3,(H,20,21)/p-1/t11-,12-,13-,16-,17+,18+,19-/m1/s1
InChI Key OXFPYCSNYOFUCH-KQBHUUJHSA-M
Popularity 7 references in papers

Physical and Chemical Properties

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Molecular Formula C19H23O5-
Molecular Weight 331.40 g/mol
Exact Mass 331.15454883 g/mol
Topological Polar Surface Area (TPSA) 86.70 Ų
XlogP 1.90
Atomic LogP (AlogP) 0.95
H-Bond Acceptor 5
H-Bond Donor 1
Rotatable Bonds 1

Synonyms

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CHEBI:58526
Q27104836
(1R,2R,5S,8S,9S,10R,11R)-5-hydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.1(5,8).0(1,10).0(2,8)]heptadecane-9-carboxylate
7alpha-hydroxy-1beta-methyl-8-methylidene-13-oxo-4a,1alpha-epoxymethano-4aalpha,4bbeta-gibbane-10beta-carboxylate

2D Structure

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2D Structure of gibberellin A20(1-)

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9678 96.78%
Caco-2 + 0.5836 58.36%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability + 0.6571 65.71%
Subcellular localzation Mitochondria 0.7660 76.60%
OATP2B1 inhibitior - 0.8569 85.69%
OATP1B1 inhibitior + 0.9129 91.29%
OATP1B3 inhibitior + 0.9008 90.08%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior + 0.5126 51.26%
BSEP inhibitior - 0.9224 92.24%
P-glycoprotein inhibitior - 0.8807 88.07%
P-glycoprotein substrate - 0.7985 79.85%
CYP3A4 substrate + 0.6258 62.58%
CYP2C9 substrate - 0.6022 60.22%
CYP2D6 substrate - 0.8691 86.91%
CYP3A4 inhibition - 0.7289 72.89%
CYP2C9 inhibition - 0.8869 88.69%
CYP2C19 inhibition - 0.7973 79.73%
CYP2D6 inhibition - 0.9372 93.72%
CYP1A2 inhibition - 0.6774 67.74%
CYP2C8 inhibition - 0.6487 64.87%
CYP inhibitory promiscuity - 0.9614 96.14%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5404 54.04%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.8982 89.82%
Skin irritation + 0.5308 53.08%
Skin corrosion - 0.8863 88.63%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6657 66.57%
Micronuclear - 0.7200 72.00%
Hepatotoxicity + 0.5500 55.00%
skin sensitisation - 0.7916 79.16%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.9500 95.00%
Nephrotoxicity + 0.6836 68.36%
Acute Oral Toxicity (c) III 0.4696 46.96%
Estrogen receptor binding + 0.8529 85.29%
Androgen receptor binding + 0.5570 55.70%
Thyroid receptor binding + 0.5346 53.46%
Glucocorticoid receptor binding + 0.7226 72.26%
Aromatase binding + 0.6155 61.55%
PPAR gamma - 0.5951 59.51%
Honey bee toxicity - 0.9262 92.62%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9967 99.67%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.67% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.40% 97.25%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.76% 94.45%
CHEMBL2581 P07339 Cathepsin D 91.59% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.49% 95.56%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.57% 97.09%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 86.11% 96.21%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.52% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.30% 99.23%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.07% 89.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 84.91% 93.04%
CHEMBL3922 P50579 Methionine aminopeptidase 2 84.02% 97.28%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.66% 95.50%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.14% 92.94%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 82.98% 93.03%
CHEMBL340 P08684 Cytochrome P450 3A4 82.19% 91.19%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 81.12% 96.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.56% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ipomoea nil
Ipomoea purpurea
Lathyrus oleraceus

Cross-Links

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PubChem 52921566
NPASS NPC270070