Geranyl 6-O-alpha-L-arabinofuranosyl-beta-D-glucopyranoside

Details

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Internal ID 60758743-5953-4856-a429-0997449829e3
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3S,4S,5R,6R)-2-[[(2R,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxymethyl]-6-[(2E)-3,7-dimethylocta-2,6-dienoxy]oxane-3,4,5-triol
SMILES (Canonical) CC(=CCCC(=CCOC1C(C(C(C(O1)COC2C(C(C(O2)CO)O)O)O)O)O)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO[C@H]2[C@@H]([C@H]([C@@H](O2)CO)O)O)O)O)O)/C)C
InChI InChI=1S/C21H36O10/c1-11(2)5-4-6-12(3)7-8-28-20-19(27)17(25)16(24)14(31-20)10-29-21-18(26)15(23)13(9-22)30-21/h5,7,13-27H,4,6,8-10H2,1-3H3/b12-7+/t13-,14+,15-,16+,17-,18+,19+,20+,21+/m0/s1
InChI Key AWDKYYYAAQQLEF-XRSPUIAPSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C21H36O10
Molecular Weight 448.50 g/mol
Exact Mass 448.23084734 g/mol
Topological Polar Surface Area (TPSA) 158.00 Ų
XlogP -0.20
Atomic LogP (AlogP) -1.04
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 10

Synonyms

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Geranyl 6-O-alpha-L-arabinofuranosyl-beta-D-glucopyranoside
beta-D-Glucopyranoside, (2E)-3,7-dimethyl-2,6-octadien-1-yl 6-O-alpha-L-arabinofuranosyl-
Compound NP-015223
SCHEMBL8135508
DTXSID201217658
AKOS040734252
NCGC00385812-01
3,7-Dimethyl-2,6-octadienyl 6-O-(alpha-L-arabinofuranosyl)-beta-D-glucopyranoside
NCGC00385812-01_C21H36O10_(2E)-3,7-Dimethyl-2,6-octadien-1-yl 6-O-alpha-L-arabinofuranosyl-beta-D-glucopyranoside

2D Structure

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2D Structure of Geranyl 6-O-alpha-L-arabinofuranosyl-beta-D-glucopyranoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5958 59.58%
Caco-2 - 0.8352 83.52%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.8417 84.17%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8932 89.32%
OATP1B3 inhibitior + 0.9127 91.27%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior - 0.6218 62.18%
P-glycoprotein inhibitior - 0.7666 76.66%
P-glycoprotein substrate - 0.9401 94.01%
CYP3A4 substrate + 0.5385 53.85%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8353 83.53%
CYP3A4 inhibition - 0.8813 88.13%
CYP2C9 inhibition - 0.8371 83.71%
CYP2C19 inhibition - 0.8340 83.40%
CYP2D6 inhibition - 0.8984 89.84%
CYP1A2 inhibition - 0.8170 81.70%
CYP2C8 inhibition - 0.8287 82.87%
CYP inhibitory promiscuity - 0.8708 87.08%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6675 66.75%
Eye corrosion - 0.9874 98.74%
Eye irritation - 0.9647 96.47%
Skin irritation - 0.7384 73.84%
Skin corrosion - 0.9554 95.54%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7020 70.20%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.8415 84.15%
skin sensitisation - 0.8815 88.15%
Respiratory toxicity - 0.8556 85.56%
Reproductive toxicity - 0.5111 51.11%
Mitochondrial toxicity + 0.5500 55.00%
Nephrotoxicity + 0.5478 54.78%
Acute Oral Toxicity (c) III 0.6233 62.33%
Estrogen receptor binding - 0.5178 51.78%
Androgen receptor binding - 0.6584 65.84%
Thyroid receptor binding - 0.4911 49.11%
Glucocorticoid receptor binding - 0.6136 61.36%
Aromatase binding + 0.6537 65.37%
PPAR gamma + 0.6244 62.44%
Honey bee toxicity - 0.7931 79.31%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.7200 72.00%
Fish aquatic toxicity + 0.9005 90.05%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.93% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 92.19% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 92.09% 96.09%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 87.16% 92.08%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.45% 99.17%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.21% 97.25%
CHEMBL2581 P07339 Cathepsin D 82.11% 98.95%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 80.85% 95.50%

Cross-Links

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PubChem 15624181
NPASS NPC152127
LOTUS LTS0044300
wikiData Q104919980