Genkwadaphnin

Details

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Internal ID 8494d4fb-34e1-45ae-a55d-84d416288a73
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > Rhamnofolane and daphnane diterpenoids
IUPAC Name [(1R,2R,6S,7S,8R,10S,11S,12R,14R,16S,17R,18R)-6,7-dihydroxy-8-(hydroxymethyl)-4,18-dimethyl-5-oxo-14-phenyl-16-prop-1-en-2-yl-9,13,15,19-tetraoxahexacyclo[12.4.1.01,11.02,6.08,10.012,16]nonadec-3-en-17-yl] benzoate
SMILES (Canonical) CC1C(C2(C3C4C1(C5C=C(C(=O)C5(C(C6(C4O6)CO)O)O)C)OC(O3)(O2)C7=CC=CC=C7)C(=C)C)OC(=O)C8=CC=CC=C8
SMILES (Isomeric) C[C@@H]1[C@H]([C@]2([C@H]3[C@H]4[C@]1([C@@H]5C=C(C(=O)[C@]5([C@@H]([C@@]6([C@H]4O6)CO)O)O)C)O[C@@](O3)(O2)C7=CC=CC=C7)C(=C)C)OC(=O)C8=CC=CC=C8
InChI InChI=1S/C34H34O10/c1-17(2)32-25(40-28(37)20-11-7-5-8-12-20)19(4)33-22-15-18(3)24(36)31(22,39)29(38)30(16-35)26(41-30)23(33)27(32)42-34(43-32,44-33)21-13-9-6-10-14-21/h5-15,19,22-23,25-27,29,35,38-39H,1,16H2,2-4H3/t19-,22-,23+,25-,26+,27-,29-,30+,31-,32+,33+,34+/m1/s1
InChI Key QKMXESBAFIKRAD-LPHDITAFSA-N
Popularity 12 references in papers

Physical and Chemical Properties

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Molecular Formula C34H34O10
Molecular Weight 602.60 g/mol
Exact Mass 602.21519728 g/mol
Topological Polar Surface Area (TPSA) 144.00 Ų
XlogP 2.70
Atomic LogP (AlogP) 2.17
H-Bond Acceptor 10
H-Bond Donor 3
Rotatable Bonds 5

Synonyms

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55073-32-0
12-beta-(Benzoyloxy)daphnetoxin
BRN 1675425
Daphnetoxin, 12-(benzoyloxy)-, (12beta)-
Daphnetoxin, 12-(benzoyloxy)-, (12-beta)-
[(1R,2R,6S,7S,8R,10S,11S,12R,14R,16S,17R,18R)-6,7-Dihydroxy-8-(hydroxymethyl)-4,18-dimethyl-5-oxo-14-phenyl-16-prop-1-en-2-yl-9,13,15,19-tetraoxahexacyclo[12.4.1.01,11.02,6.08,10.012,16]nonadec-3-en-17-yl] benzoate
DTXSID10970422
LS-59190
5,5a-Dihydroxy-4a-(hydroxymethyl)-7,9-dimethyl-6-oxo-2-phenyl-10a-(prop-1-en-2-yl)-3a,3c,4a,5,5a,6,8a,9,10,10a-decahydro-2H,3bH-2,8b-epoxyoxireno[6,7]azuleno[5,4-e][1,3]benzodioxol-10-yl benzoate

2D Structure

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2D Structure of Genkwadaphnin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7867 78.67%
Caco-2 - 0.8081 80.81%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.7105 71.05%
OATP2B1 inhibitior - 0.7143 71.43%
OATP1B1 inhibitior + 0.8265 82.65%
OATP1B3 inhibitior + 0.9265 92.65%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.9581 95.81%
P-glycoprotein inhibitior + 0.7516 75.16%
P-glycoprotein substrate + 0.5441 54.41%
CYP3A4 substrate + 0.6807 68.07%
CYP2C9 substrate - 0.8068 80.68%
CYP2D6 substrate - 0.8682 86.82%
CYP3A4 inhibition - 0.5848 58.48%
CYP2C9 inhibition - 0.7863 78.63%
CYP2C19 inhibition - 0.7722 77.22%
CYP2D6 inhibition - 0.9128 91.28%
CYP1A2 inhibition - 0.8338 83.38%
CYP2C8 inhibition + 0.6946 69.46%
CYP inhibitory promiscuity - 0.6317 63.17%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6235 62.35%
Eye corrosion - 0.9829 98.29%
Eye irritation - 0.8917 89.17%
Skin irritation - 0.7523 75.23%
Skin corrosion - 0.9295 92.95%
Ames mutagenesis - 0.7700 77.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6749 67.49%
Micronuclear + 0.5759 57.59%
Hepatotoxicity - 0.5090 50.90%
skin sensitisation - 0.8099 80.99%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.7500 75.00%
Nephrotoxicity + 0.8084 80.84%
Acute Oral Toxicity (c) III 0.4113 41.13%
Estrogen receptor binding + 0.7714 77.14%
Androgen receptor binding + 0.7370 73.70%
Thyroid receptor binding + 0.6614 66.14%
Glucocorticoid receptor binding + 0.7106 71.06%
Aromatase binding + 0.6187 61.87%
PPAR gamma + 0.6599 65.99%
Honey bee toxicity - 0.7978 79.78%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.6700 67.00%
Fish aquatic toxicity + 0.9835 98.35%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4040 P28482 MAP kinase ERK2 98.97% 83.82%
CHEMBL1293249 Q13887 Kruppel-like factor 5 96.41% 86.33%
CHEMBL2581 P07339 Cathepsin D 95.52% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 93.87% 85.14%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 93.21% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 92.78% 91.49%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.98% 96.09%
CHEMBL2035 P08912 Muscarinic acetylcholine receptor M5 89.88% 94.62%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.34% 95.56%
CHEMBL221 P23219 Cyclooxygenase-1 88.12% 90.17%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 86.22% 83.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 85.81% 99.23%
CHEMBL5028 O14672 ADAM10 82.33% 97.50%
CHEMBL1293294 P51151 Ras-related protein Rab-9A 81.44% 87.67%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.38% 96.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Daphne genkwa

Cross-Links

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PubChem 124210
NPASS NPC137329