Genkdaphine

Details

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Internal ID aa675cba-13ef-4bd4-b028-3796d659b080
Taxonomy Lignans, neolignans and related compounds > Lignan lactones
IUPAC Name (3R,3aR,6R,6aS)-6-(1,3-benzodioxol-4-yl)-3-(1,3-benzodioxol-5-yl)-3,3a,6,6a-tetrahydro-1H-furo[3,4-c]furan-4-one
SMILES (Canonical) C1C2C(C(O1)C3=CC4=C(C=C3)OCO4)C(=O)OC2C5=C6C(=CC=C5)OCO6
SMILES (Isomeric) C1[C@@H]2[C@H]([C@@H](O1)C3=CC4=C(C=C3)OCO4)C(=O)O[C@H]2C5=C6C(=CC=C5)OCO6
InChI InChI=1S/C20H16O7/c21-20-16-12(18(27-20)11-2-1-3-14-19(11)26-9-24-14)7-22-17(16)10-4-5-13-15(6-10)25-8-23-13/h1-6,12,16-18H,7-9H2/t12-,16-,17+,18+/m1/s1
InChI Key SGWLAVZUOVBYOW-QTXLCTLRSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C20H16O7
Molecular Weight 368.30 g/mol
Exact Mass 368.08960285 g/mol
Topological Polar Surface Area (TPSA) 72.40 Ų
XlogP 2.40
Atomic LogP (AlogP) 2.75
H-Bond Acceptor 7
H-Bond Donor 0
Rotatable Bonds 2

Synonyms

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4-Oxosesamin
139402-21-4
4-Oxo-2,6-bis(3',4'-methylenedioxyphenyl)-3,7-dioxabicyclo(3.3.0)octane
DTXSID10161035
(3R,3aR,6R,6aS)-6-(1,3-benzodioxol-4-yl)-3-(1,3-benzodioxol-5-yl)-3,3a,6,6a-tetrahydro-1H-furo[3,4-c]furan-4-one
1H,3H-Furo(3,4-c)furan-1-one, 3,6-di-1,3-benzodioxol-5-yltetrahydro-, (3R-(3alpha,3aalpha,6alpha,6aalpha))-

2D Structure

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2D Structure of Genkdaphine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9954 99.54%
Caco-2 + 0.5407 54.07%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6857 68.57%
Subcellular localzation Mitochondria 0.7107 71.07%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9141 91.41%
OATP1B3 inhibitior + 0.9490 94.90%
MATE1 inhibitior - 0.7400 74.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior + 0.8680 86.80%
P-glycoprotein inhibitior + 0.6900 69.00%
P-glycoprotein substrate - 0.8452 84.52%
CYP3A4 substrate + 0.5680 56.80%
CYP2C9 substrate + 0.5918 59.18%
CYP2D6 substrate - 0.8352 83.52%
CYP3A4 inhibition + 0.7884 78.84%
CYP2C9 inhibition + 0.8505 85.05%
CYP2C19 inhibition + 0.8335 83.35%
CYP2D6 inhibition + 0.6483 64.83%
CYP1A2 inhibition + 0.7582 75.82%
CYP2C8 inhibition - 0.6879 68.79%
CYP inhibitory promiscuity + 0.8453 84.53%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Warning 0.4490 44.90%
Eye corrosion - 0.9751 97.51%
Eye irritation - 0.6556 65.56%
Skin irritation - 0.6000 60.00%
Skin corrosion - 0.9592 95.92%
Ames mutagenesis + 0.6000 60.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6878 68.78%
Micronuclear + 0.8174 81.74%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.6568 65.68%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.5556 55.56%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity + 0.5688 56.88%
Acute Oral Toxicity (c) III 0.7018 70.18%
Estrogen receptor binding + 0.8917 89.17%
Androgen receptor binding + 0.7339 73.39%
Thyroid receptor binding + 0.6318 63.18%
Glucocorticoid receptor binding + 0.5469 54.69%
Aromatase binding - 0.5162 51.62%
PPAR gamma + 0.7183 71.83%
Honey bee toxicity - 0.6919 69.19%
Biodegradation - 0.6250 62.50%
Crustacea aquatic toxicity + 0.5900 59.00%
Fish aquatic toxicity + 0.9621 96.21%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.69% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.46% 97.09%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 94.72% 93.40%
CHEMBL240 Q12809 HERG 94.24% 89.76%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 93.98% 95.56%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 93.30% 96.77%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.87% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.30% 89.00%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 88.28% 94.80%
CHEMBL1841 P06241 Tyrosine-protein kinase FYN 87.86% 81.29%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.43% 86.33%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 86.30% 92.62%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.37% 100.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.11% 99.23%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 82.96% 100.00%
CHEMBL2581 P07339 Cathepsin D 81.81% 98.95%
CHEMBL1951 P21397 Monoamine oxidase A 80.94% 91.49%
CHEMBL2781 P19634 Sodium/hydrogen exchanger 1 80.82% 90.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Daphne genkwa
Glycine max
Lupinus luteus
Piptanthus nepalensis
Styphnolobium japonicum

Cross-Links

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PubChem 126490
NPASS NPC6072
LOTUS LTS0020601
wikiData Q83029397