Genameside C

Details

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Internal ID 9b8789ec-924e-4375-89b5-cd43c81d615e
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Iridoid O-glycosides
IUPAC Name methyl (1S,4aS,7aS)-1-[(2S,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-7-(hydroxymethyl)-1,4a,5,7a-tetrahydrocyclopenta[c]pyran-4-carboxylate
SMILES (Canonical) COC(=O)C1=COC(C2C1CC=C2CO)OC3C(C(C(C(O3)CO)OC4C(C(C(C(O4)CO)O)O)O)O)O
SMILES (Isomeric) COC(=O)C1=CO[C@H]([C@H]2[C@@H]1CC=C2CO)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O)O
InChI InChI=1S/C23H34O15/c1-33-20(32)10-7-34-21(13-8(4-24)2-3-9(10)13)38-23-18(31)16(29)19(12(6-26)36-23)37-22-17(30)15(28)14(27)11(5-25)35-22/h2,7,9,11-19,21-31H,3-6H2,1H3/t9-,11-,12-,13-,14-,15+,16-,17-,18-,19-,21+,22+,23+/m1/s1
InChI Key JRYVBZDSFXDJAN-NWTASXAMSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C23H34O15
Molecular Weight 550.50 g/mol
Exact Mass 550.18977037 g/mol
Topological Polar Surface Area (TPSA) 234.00 Ų
XlogP -4.50
Atomic LogP (AlogP) -4.40
H-Bond Acceptor 15
H-Bond Donor 8
Rotatable Bonds 8

Synonyms

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CHEMBL2311862

2D Structure

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2D Structure of Genameside C

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4730 47.30%
Caco-2 - 0.8939 89.39%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7455 74.55%
OATP2B1 inhibitior - 0.8650 86.50%
OATP1B1 inhibitior + 0.7994 79.94%
OATP1B3 inhibitior + 0.9654 96.54%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.7269 72.69%
P-glycoprotein inhibitior - 0.7251 72.51%
P-glycoprotein substrate - 0.7399 73.99%
CYP3A4 substrate + 0.6362 63.62%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8572 85.72%
CYP3A4 inhibition - 0.9613 96.13%
CYP2C9 inhibition - 0.9352 93.52%
CYP2C19 inhibition - 0.8331 83.31%
CYP2D6 inhibition - 0.9035 90.35%
CYP1A2 inhibition - 0.8879 88.79%
CYP2C8 inhibition - 0.6393 63.93%
CYP inhibitory promiscuity - 0.8142 81.42%
UGT catelyzed - 0.5638 56.38%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6981 69.81%
Eye corrosion - 0.9868 98.68%
Eye irritation - 0.9398 93.98%
Skin irritation - 0.8095 80.95%
Skin corrosion - 0.9587 95.87%
Ames mutagenesis - 0.5937 59.37%
Human Ether-a-go-go-Related Gene inhibition + 0.6564 65.64%
Micronuclear - 0.8200 82.00%
Hepatotoxicity - 0.7875 78.75%
skin sensitisation - 0.8808 88.08%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.7556 75.56%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity + 0.6575 65.75%
Acute Oral Toxicity (c) III 0.4591 45.91%
Estrogen receptor binding + 0.6849 68.49%
Androgen receptor binding + 0.6420 64.20%
Thyroid receptor binding - 0.5831 58.31%
Glucocorticoid receptor binding - 0.5708 57.08%
Aromatase binding + 0.6145 61.45%
PPAR gamma + 0.5585 55.85%
Honey bee toxicity - 0.7733 77.33%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.7500 75.00%
Fish aquatic toxicity + 0.7201 72.01%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.97% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.64% 96.09%
CHEMBL3401 O75469 Pregnane X receptor 87.14% 94.73%
CHEMBL5255 O00206 Toll-like receptor 4 85.53% 92.50%
CHEMBL3137262 O60341 LSD1/CoREST complex 84.93% 97.09%
CHEMBL4208 P20618 Proteasome component C5 84.31% 90.00%
CHEMBL2581 P07339 Cathepsin D 84.15% 98.95%
CHEMBL218 P21554 Cannabinoid CB1 receptor 84.13% 96.61%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 82.06% 96.00%
CHEMBL5028 O14672 ADAM10 81.56% 97.50%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.51% 94.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.80% 95.89%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.37% 95.83%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.07% 86.92%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gardenia jasminoides
Genipa americana

Cross-Links

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PubChem 11692460
NPASS NPC234304
LOTUS LTS0153991
wikiData Q105134208