Gemin A

Details

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Internal ID f0402e93-d3a2-47ae-9346-83a46b069510
Taxonomy Phenylpropanoids and polyketides > Tannins > Hydrolyzable tannins
IUPAC Name [(1R,2S,19R,20R,22R)-7,8,9,12,13,14,28,29,30,33,34,35-dodecahydroxy-4,17,25,38-tetraoxo-3,18,21,24,39-pentaoxaheptacyclo[20.17.0.02,19.05,10.011,16.026,31.032,37]nonatriaconta-5,7,9,11,13,15,26,28,30,32,34,36-dodecaen-20-yl] 2-[5-[[(10R,11S,12R,13R,15R)-3,4,5,21,22,23-hexahydroxy-8,18-dioxo-11,12-bis[(3,4,5-trihydroxybenzoyl)oxy]-9,14,17-trioxatetracyclo[17.4.0.02,7.010,15]tricosa-1(23),2,4,6,19,21-hexaen-13-yl]oxycarbonyl]-2,3-dihydroxyphenoxy]-3,4,5-trihydroxybenzoate
SMILES (Canonical) C1C2C(C3C(C(O2)OC(=O)C4=CC(=C(C(=C4OC5=CC(=CC(=C5O)O)C(=O)OC6C(C(C7C(O6)COC(=O)C8=CC(=C(C(=C8C9=C(C(=C(C=C9C(=O)O7)O)O)O)O)O)O)OC(=O)C2=CC(=C(C(=C2)O)O)O)OC(=O)C2=CC(=C(C(=C2)O)O)O)O)O)O)OC(=O)C2=CC(=C(C(=C2C2=C(C(=C(C=C2C(=O)O3)O)O)O)O)O)O)OC(=O)C2=CC(=C(C(=C2C2=C(C(=C(C=C2C(=O)O1)O)O)O)O)O)O
SMILES (Isomeric) C1[C@@H]2[C@H]([C@H]3[C@H]([C@H](O2)OC(=O)C4=CC(=C(C(=C4OC5=CC(=CC(=C5O)O)C(=O)O[C@@H]6[C@@H]([C@H]([C@H]7[C@H](O6)COC(=O)C8=CC(=C(C(=C8C9=C(C(=C(C=C9C(=O)O7)O)O)O)O)O)O)OC(=O)C2=CC(=C(C(=C2)O)O)O)OC(=O)C2=CC(=C(C(=C2)O)O)O)O)O)O)OC(=O)C2=CC(=C(C(=C2C2=C(C(=C(C=C2C(=O)O3)O)O)O)O)O)O)OC(=O)C2=CC(=C(C(=C2C2=C(C(=C(C=C2C(=O)O1)O)O)O)O)O)O
InChI InChI=1S/C82H56O52/c83-26-1-16(2-27(84)47(26)95)71(112)129-67-65-39(14-122-74(115)19-7-31(88)50(98)57(105)41(19)43-21(76(117)127-65)9-33(90)52(100)59(43)107)125-81(69(67)131-72(113)17-3-28(85)48(96)29(86)4-17)133-73(114)18-5-30(87)49(97)38(6-18)124-64-25(13-37(94)56(104)63(64)111)80(121)134-82-70-68(130-78(119)23-11-35(92)54(102)61(109)45(23)46-24(79(120)132-70)12-36(93)55(103)62(46)110)66-40(126-82)15-123-75(116)20-8-32(89)51(99)58(106)42(20)44-22(77(118)128-66)10-34(91)53(101)60(44)108/h1-13,39-40,65-70,81-111H,14-15H2/t39-,40-,65-,66-,67+,68+,69-,70-,81-,82-/m1/s1
InChI Key ODXMIHPUPFEYDB-HISCDKSNSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C82H56O52
Molecular Weight 1873.30 g/mol
Exact Mass 1872.1737620 g/mol
Topological Polar Surface Area (TPSA) 877.00 Ų
XlogP 4.50

Synonyms

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CHEBI:5297
Q27106708

2D Structure

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2D Structure of Gemin A

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
No predicted properties yet!

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.76% 91.11%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 95.91% 95.17%
CHEMBL1951 P21397 Monoamine oxidase A 95.76% 91.49%
CHEMBL3475 P05121 Plasminogen activator inhibitor-1 95.25% 83.00%
CHEMBL4657 Q6V1X1 Dipeptidyl peptidase VIII 94.03% 97.21%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 91.36% 94.00%
CHEMBL3194 P02766 Transthyretin 90.26% 90.71%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 90.13% 96.21%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.07% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 89.96% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.61% 95.56%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 89.36% 99.15%
CHEMBL3060 Q9Y345 Glycine transporter 2 89.27% 99.17%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.53% 99.23%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 86.43% 96.95%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 85.70% 94.42%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 85.51% 83.57%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.49% 95.89%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 84.45% 95.50%
CHEMBL4208 P20618 Proteasome component C5 84.16% 90.00%
CHEMBL2535 P11166 Glucose transporter 82.96% 98.75%
CHEMBL3137262 O60341 LSD1/CoREST complex 82.53% 97.09%
CHEMBL4530 P00488 Coagulation factor XIII 82.52% 96.00%
CHEMBL340 P08684 Cytochrome P450 3A4 82.20% 91.19%
CHEMBL3401 O75469 Pregnane X receptor 81.59% 94.73%
CHEMBL1899 P46098 Serotonin 3a (5-HT3a) receptor 81.53% 100.00%
CHEMBL2094127 P06493 Cyclin-dependent kinase 1/cyclin B 81.33% 96.00%
CHEMBL2581 P07339 Cathepsin D 81.22% 98.95%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.11% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Geum aleppicum

Cross-Links

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PubChem 16129624
LOTUS LTS0068739
wikiData Q27106708