Gemichalcone B

Details

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Internal ID 5aca757c-04a7-4be9-9347-25a45a54df47
Taxonomy Phenylpropanoids and polyketides > Linear 1,3-diarylpropanoids > Chalcones and dihydrochalcones > 3-prenylated chalcones
IUPAC Name [(Z)-4-[2,6-dihydroxy-3-[(E)-3-(4-hydroxyphenyl)prop-2-enoyl]phenyl]-2-methylbut-2-enyl] (E)-3-(4-hydroxyphenyl)prop-2-enoate
SMILES (Canonical) CC(=CCC1=C(C=CC(=C1O)C(=O)C=CC2=CC=C(C=C2)O)O)COC(=O)C=CC3=CC=C(C=C3)O
SMILES (Isomeric) C/C(=C/CC1=C(C=CC(=C1O)C(=O)/C=C/C2=CC=C(C=C2)O)O)/COC(=O)/C=C/C3=CC=C(C=C3)O
InChI InChI=1S/C29H26O7/c1-19(18-36-28(34)17-8-21-5-11-23(31)12-6-21)2-13-24-27(33)16-14-25(29(24)35)26(32)15-7-20-3-9-22(30)10-4-20/h2-12,14-17,30-31,33,35H,13,18H2,1H3/b15-7+,17-8+,19-2-
InChI Key YKTQNXNBVRMYNF-VFZUQKNSSA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C29H26O7
Molecular Weight 486.50 g/mol
Exact Mass 486.16785316 g/mol
Topological Polar Surface Area (TPSA) 124.00 Ų
XlogP 6.20
Atomic LogP (AlogP) 5.15
H-Bond Acceptor 7
H-Bond Donor 4
Rotatable Bonds 9

Synonyms

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CHEMBL497716
3'-(4-Coumaroyloxy-3-methylbutyl-2(Z)-enyl)-4,2',4'-trihydroxychalcone
gemichalcones B
C29H26O7
CHEBI:140145
BDBM50269277
LMPK12120064
[(Z)-4-[2,6-dihydroxy-3-[(E)-3-(4-hydroxyphenyl)prop-2-enoyl]phenyl]-2-methylbut-2-enyl] (E)-3-(4-hydroxyphenyl)prop-2-enoate

2D Structure

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2D Structure of Gemichalcone B

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9851 98.51%
Caco-2 - 0.8080 80.80%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.8826 88.26%
OATP2B1 inhibitior + 0.5661 56.61%
OATP1B1 inhibitior + 0.8673 86.73%
OATP1B3 inhibitior + 0.9068 90.68%
MATE1 inhibitior - 0.7400 74.00%
OCT2 inhibitior - 0.7838 78.38%
BSEP inhibitior + 0.9020 90.20%
P-glycoprotein inhibitior + 0.8070 80.70%
P-glycoprotein substrate - 0.7915 79.15%
CYP3A4 substrate + 0.5383 53.83%
CYP2C9 substrate - 0.5921 59.21%
CYP2D6 substrate - 0.8841 88.41%
CYP3A4 inhibition - 0.8475 84.75%
CYP2C9 inhibition + 0.6595 65.95%
CYP2C19 inhibition + 0.6251 62.51%
CYP2D6 inhibition - 0.7792 77.92%
CYP1A2 inhibition + 0.7887 78.87%
CYP2C8 inhibition + 0.7560 75.60%
CYP inhibitory promiscuity + 0.6195 61.95%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.8361 83.61%
Carcinogenicity (trinary) Non-required 0.7271 72.71%
Eye corrosion - 0.9936 99.36%
Eye irritation - 0.8212 82.12%
Skin irritation - 0.7953 79.53%
Skin corrosion - 0.9509 95.09%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7254 72.54%
Micronuclear - 0.5700 57.00%
Hepatotoxicity - 0.6375 63.75%
skin sensitisation - 0.6485 64.85%
Respiratory toxicity - 0.7556 75.56%
Reproductive toxicity + 0.6556 65.56%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.6446 64.46%
Acute Oral Toxicity (c) III 0.6236 62.36%
Estrogen receptor binding + 0.8111 81.11%
Androgen receptor binding + 0.9159 91.59%
Thyroid receptor binding + 0.6281 62.81%
Glucocorticoid receptor binding + 0.8412 84.12%
Aromatase binding + 0.6082 60.82%
PPAR gamma + 0.8235 82.35%
Honey bee toxicity - 0.8570 85.70%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.7355 73.55%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL221 P23219 Cyclooxygenase-1 14000 nM
IC50
PMID: 11858749
CHEMBL230 P35354 Cyclooxygenase-2 38400 nM
IC50
PMID: 11858749

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.93% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.78% 86.33%
CHEMBL1951 P21397 Monoamine oxidase A 94.10% 91.49%
CHEMBL3194 P02766 Transthyretin 92.13% 90.71%
CHEMBL2581 P07339 Cathepsin D 89.81% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 89.26% 94.73%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 88.90% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.80% 94.45%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.77% 95.56%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.12% 99.17%
CHEMBL4208 P20618 Proteasome component C5 86.12% 90.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 85.43% 93.10%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.84% 96.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.06% 95.50%
CHEMBL2288 Q13526 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 82.57% 91.71%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 81.73% 85.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 80.42% 99.15%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Artocarpus altilis
Artocarpus lacucha
Canthium berberidifolium
Hypericum geminiflorum

Cross-Links

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PubChem 10413126
NPASS NPC112789
ChEMBL CHEMBL497716
LOTUS LTS0270959
wikiData Q76415619