Gelsedine

Details

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Internal ID 5bd438b0-b789-478b-850c-cf221b094de3
Taxonomy Alkaloids and derivatives > Gelsemium alkaloids
IUPAC Name 6-ethyl-1'-methoxyspiro[10-oxa-5-azatricyclo[5.3.1.04,8]undecane-2,3'-indole]-2'-one
SMILES (Canonical) CCC1C2CC3C4(CC(C2CO3)N1)C5=CC=CC=C5N(C4=O)OC
SMILES (Isomeric) CCC1C2CC3C4(CC(C2CO3)N1)C5=CC=CC=C5N(C4=O)OC
InChI InChI=1S/C19H24N2O3/c1-3-14-11-8-17-19(9-15(20-14)12(11)10-24-17)13-6-4-5-7-16(13)21(23-2)18(19)22/h4-7,11-12,14-15,17,20H,3,8-10H2,1-2H3
InChI Key LDBVYQSHIPCQPT-UHFFFAOYSA-N
Popularity 9 references in papers

Physical and Chemical Properties

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Molecular Formula C19H24N2O3
Molecular Weight 328.40 g/mol
Exact Mass 328.17869263 g/mol
Topological Polar Surface Area (TPSA) 50.80 Ų
XlogP 1.90
Atomic LogP (AlogP) 2.01
H-Bond Acceptor 4
H-Bond Donor 1
Rotatable Bonds 2

Synonyms

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7096-96-0
NSC71050
NSC 71050
6-Ethyl-1'-methoxyspiro[10-oxa-5-azatricyclo[5.3.1.04,8]undecane-2,3'-indole]-2'-one
(Spiro(3H-indole-3,7'(6'H)-(3,6)methano(1H)oxepino(4,3-b)pyrrol)-2(1H)-one,) 2'-ethyl-2',3',3'a, 4',8',8'a-hexahydro-1-methoxy-
Spiro[3H-indole-3,7'(6'H)-[3,6]methano[1H]oxepino[4,3-b]pyrrol]-2(1H)-one, 2'-ethyl-2',3',3'a,4',8',8'a-hexahydro-1-methoxy-
Spiro[3H-indole-3,7'(6'H)-[3,6]methano[1H]oxepino[4,3-b]pyrrol]-2(1H)-one, 2'-ethyl-2',3',3'a,4',8',8'a-hexahydro-1-methoxy-, [2'R-(2'.alpha.,3'.alpha.,3'a.beta.,6'.alpha.,7'.alpha.,8'a.beta.)]-
Dihydrohumantenmine
DTXSID70991259
LDBVYQSHIPCQPT-UHFFFAOYSA-N
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of Gelsedine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9911 99.11%
Caco-2 + 0.6673 66.73%
Blood Brain Barrier + 0.8500 85.00%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.4581 45.81%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9138 91.38%
OATP1B3 inhibitior + 0.9414 94.14%
MATE1 inhibitior - 0.8200 82.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior - 0.4656 46.56%
P-glycoprotein inhibitior - 0.7369 73.69%
P-glycoprotein substrate - 0.5322 53.22%
CYP3A4 substrate + 0.6354 63.54%
CYP2C9 substrate - 0.8005 80.05%
CYP2D6 substrate + 0.3774 37.74%
CYP3A4 inhibition - 0.7707 77.07%
CYP2C9 inhibition - 0.6703 67.03%
CYP2C19 inhibition - 0.6358 63.58%
CYP2D6 inhibition - 0.8227 82.27%
CYP1A2 inhibition - 0.6421 64.21%
CYP2C8 inhibition - 0.6070 60.70%
CYP inhibitory promiscuity - 0.5251 52.51%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.8600 86.00%
Carcinogenicity (trinary) Non-required 0.5446 54.46%
Eye corrosion - 0.9839 98.39%
Eye irritation - 0.9895 98.95%
Skin irritation - 0.7833 78.33%
Skin corrosion - 0.9320 93.20%
Ames mutagenesis + 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8292 82.92%
Micronuclear + 0.7100 71.00%
Hepatotoxicity + 0.5052 50.52%
skin sensitisation - 0.8422 84.22%
Respiratory toxicity + 0.8556 85.56%
Reproductive toxicity + 0.9111 91.11%
Mitochondrial toxicity + 0.8500 85.00%
Nephrotoxicity - 0.7472 74.72%
Acute Oral Toxicity (c) III 0.5681 56.81%
Estrogen receptor binding + 0.6767 67.67%
Androgen receptor binding + 0.5944 59.44%
Thyroid receptor binding + 0.5520 55.20%
Glucocorticoid receptor binding - 0.5522 55.22%
Aromatase binding + 0.5245 52.45%
PPAR gamma + 0.5899 58.99%
Honey bee toxicity - 0.7921 79.21%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.8251 82.51%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.06% 96.09%
CHEMBL2581 P07339 Cathepsin D 95.76% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.34% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 92.24% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.65% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.09% 91.11%
CHEMBL255 P29275 Adenosine A2b receptor 87.48% 98.59%
CHEMBL240 Q12809 HERG 86.72% 89.76%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 84.62% 92.67%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.23% 97.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 83.89% 94.45%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 83.56% 82.69%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.85% 99.23%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 81.42% 85.14%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 80.02% 93.40%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gelsemium elegans
Gelsemium sempervirens

Cross-Links

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PubChem 251002
LOTUS LTS0252838
wikiData Q82980961