Garciniaxanthone E

Details

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Internal ID bf70cbbc-c79f-4afa-88b4-4485a0e3e6b7
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones > 8-prenylated xanthones
IUPAC Name 2-[(2E)-3,7-dimethylocta-2,6-dienyl]-3,4,6,8-tetrahydroxy-1-(3-methylbut-2-enyl)xanthen-9-one
SMILES (Canonical) CC(=CCCC(=CCC1=C(C2=C(C(=C1O)O)OC3=CC(=CC(=C3C2=O)O)O)CC=C(C)C)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CC1=C(C2=C(C(=C1O)O)OC3=CC(=CC(=C3C2=O)O)O)CC=C(C)C)/C)C
InChI InChI=1S/C28H32O6/c1-15(2)7-6-8-17(5)10-12-20-19(11-9-16(3)4)23-26(32)24-21(30)13-18(29)14-22(24)34-28(23)27(33)25(20)31/h7,9-10,13-14,29-31,33H,6,8,11-12H2,1-5H3/b17-10+
InChI Key BRKFTRQHPIQVNO-LICLKQGHSA-N
Popularity 7 references in papers

Physical and Chemical Properties

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Molecular Formula C28H32O6
Molecular Weight 464.50 g/mol
Exact Mass 464.21988874 g/mol
Topological Polar Surface Area (TPSA) 107.00 Ų
XlogP 7.80
Atomic LogP (AlogP) 6.51
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 7

Synonyms

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173294-74-1
2-[(2E)-3,7-dimethylocta-2,6-dienyl]-3,4,6,8-tetrahydroxy-1-(3-methylbut-2-enyl)xanthen-9-one
(E)-2-(3,7-Dimethylocta-2,6-dien-1-yl)-3,4,6,8-tetrahydroxy-1-(3-methylbut-2-en-1-yl)-9H-xanthen-9-one
orb1682519
9H-Xanthen-9-one, 2-[(2E)-3,7-dimethyl-2,6-octadienyl]-3,4,6,8-tetrahydroxy-1-(3-methyl-2-butenyl)-
HY-N3928
AKOS040761772
DA-63700
FS-10478
CS-0024467

2D Structure

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2D Structure of Garciniaxanthone E

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9297 92.97%
Caco-2 - 0.7196 71.96%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.6143 61.43%
Subcellular localzation Mitochondria 0.6879 68.79%
OATP2B1 inhibitior + 0.5785 57.85%
OATP1B1 inhibitior + 0.7961 79.61%
OATP1B3 inhibitior + 0.9287 92.87%
MATE1 inhibitior - 0.7000 70.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.9289 92.89%
P-glycoprotein inhibitior + 0.7449 74.49%
P-glycoprotein substrate - 0.7106 71.06%
CYP3A4 substrate + 0.5803 58.03%
CYP2C9 substrate - 0.6039 60.39%
CYP2D6 substrate - 0.8389 83.89%
CYP3A4 inhibition - 0.6610 66.10%
CYP2C9 inhibition + 0.5541 55.41%
CYP2C19 inhibition + 0.6354 63.54%
CYP2D6 inhibition - 0.6885 68.85%
CYP1A2 inhibition + 0.8395 83.95%
CYP2C8 inhibition + 0.5653 56.53%
CYP inhibitory promiscuity - 0.5116 51.16%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7641 76.41%
Eye corrosion - 0.9904 99.04%
Eye irritation - 0.8132 81.32%
Skin irritation - 0.7138 71.38%
Skin corrosion - 0.9184 91.84%
Ames mutagenesis + 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8349 83.49%
Micronuclear - 0.8200 82.00%
Hepatotoxicity - 0.7000 70.00%
skin sensitisation - 0.7431 74.31%
Respiratory toxicity + 0.6444 64.44%
Reproductive toxicity + 0.8444 84.44%
Mitochondrial toxicity + 0.7875 78.75%
Nephrotoxicity - 0.8405 84.05%
Acute Oral Toxicity (c) III 0.5084 50.84%
Estrogen receptor binding + 0.8901 89.01%
Androgen receptor binding + 0.7787 77.87%
Thyroid receptor binding + 0.6063 60.63%
Glucocorticoid receptor binding + 0.8419 84.19%
Aromatase binding + 0.6484 64.84%
PPAR gamma + 0.8610 86.10%
Honey bee toxicity - 0.8624 86.24%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.04% 91.11%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 96.41% 89.34%
CHEMBL2581 P07339 Cathepsin D 95.48% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 94.24% 94.73%
CHEMBL1929 P47989 Xanthine dehydrogenase 93.26% 96.12%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.35% 89.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 91.12% 99.17%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 90.17% 92.08%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.54% 86.33%
CHEMBL1951 P21397 Monoamine oxidase A 89.49% 91.49%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 87.62% 99.23%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 86.48% 95.56%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 85.04% 93.10%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 84.80% 90.71%
CHEMBL3194 P02766 Transthyretin 84.71% 90.71%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 82.82% 95.64%
CHEMBL1163101 O75460 Serine/threonine-protein kinase/endoribonuclease IRE1 82.74% 98.11%
CHEMBL4208 P20618 Proteasome component C5 82.00% 90.00%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 81.68% 83.57%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia dulcis
Garcinia subelliptica
Garcinia xanthochymus

Cross-Links

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PubChem 10457167
NPASS NPC290611
LOTUS LTS0226546
wikiData Q104403756