Garcinianin

Details

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Internal ID 1e8bda8c-bf70-43b1-810f-945cbef5edf7
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Biflavonoids and polyflavonoids
IUPAC Name 8-[(2R,3S)-5,7-dihydroxy-2-(4-hydroxyphenyl)-4-oxo-2,3-dihydrochromen-3-yl]-3,5,7-trihydroxy-2-(4-hydroxyphenyl)chromen-4-one
SMILES (Canonical) C1=CC(=CC=C1C2C(C(=O)C3=C(C=C(C=C3O2)O)O)C4=C(C=C(C5=C4OC(=C(C5=O)O)C6=CC=C(C=C6)O)O)O)O
SMILES (Isomeric) C1=CC(=CC=C1[C@H]2[C@@H](C(=O)C3=C(C=C(C=C3O2)O)O)C4=C(C=C(C5=C4OC(=C(C5=O)O)C6=CC=C(C=C6)O)O)O)O
InChI InChI=1S/C30H20O11/c31-14-5-1-12(2-6-14)28-24(25(37)21-17(34)9-16(33)10-20(21)40-28)22-18(35)11-19(36)23-26(38)27(39)29(41-30(22)23)13-3-7-15(32)8-4-13/h1-11,24,28,31-36,39H/t24-,28+/m1/s1
InChI Key ZQUOQMBQCOHMKD-YWEHKCAJSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C30H20O11
Molecular Weight 556.50 g/mol
Exact Mass 556.10056145 g/mol
Topological Polar Surface Area (TPSA) 194.00 Ų
XlogP 4.70
Atomic LogP (AlogP) 4.50
H-Bond Acceptor 11
H-Bond Donor 7
Rotatable Bonds 3

Synonyms

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CHEMBL445516

2D Structure

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2D Structure of Garcinianin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8970 89.70%
Caco-2 - 0.9092 90.92%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.6473 64.73%
OATP2B1 inhibitior - 0.5477 54.77%
OATP1B1 inhibitior + 0.7941 79.41%
OATP1B3 inhibitior + 0.7972 79.72%
MATE1 inhibitior - 0.8000 80.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.6516 65.16%
P-glycoprotein inhibitior + 0.6273 62.73%
P-glycoprotein substrate - 0.6505 65.05%
CYP3A4 substrate + 0.6222 62.22%
CYP2C9 substrate + 0.6024 60.24%
CYP2D6 substrate - 0.8223 82.23%
CYP3A4 inhibition + 0.5372 53.72%
CYP2C9 inhibition + 0.8756 87.56%
CYP2C19 inhibition - 0.5286 52.86%
CYP2D6 inhibition - 0.9310 93.10%
CYP1A2 inhibition + 0.6691 66.91%
CYP2C8 inhibition + 0.8846 88.46%
CYP inhibitory promiscuity - 0.5307 53.07%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.7332 73.32%
Eye corrosion - 0.9919 99.19%
Eye irritation - 0.5979 59.79%
Skin irritation + 0.5339 53.39%
Skin corrosion - 0.9375 93.75%
Ames mutagenesis + 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7135 71.35%
Micronuclear + 0.9100 91.00%
Hepatotoxicity - 0.5750 57.50%
skin sensitisation - 0.8443 84.43%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity + 0.4714 47.14%
Acute Oral Toxicity (c) II 0.6429 64.29%
Estrogen receptor binding + 0.8199 81.99%
Androgen receptor binding + 0.8334 83.34%
Thyroid receptor binding + 0.6352 63.52%
Glucocorticoid receptor binding + 0.7607 76.07%
Aromatase binding - 0.5461 54.61%
PPAR gamma + 0.7787 77.87%
Honey bee toxicity - 0.8043 80.43%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity + 0.5200 52.00%
Fish aquatic toxicity + 0.9061 90.61%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.46% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.18% 89.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 93.07% 99.15%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.29% 99.23%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.02% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.61% 94.45%
CHEMBL1951 P21397 Monoamine oxidase A 91.61% 91.49%
CHEMBL2581 P07339 Cathepsin D 91.18% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.66% 95.56%
CHEMBL3194 P02766 Transthyretin 89.17% 90.71%
CHEMBL3401 O75469 Pregnane X receptor 86.29% 94.73%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 86.14% 85.11%
CHEMBL5339 Q5NUL3 G-protein coupled receptor 120 84.61% 95.78%
CHEMBL3137262 O60341 LSD1/CoREST complex 83.65% 97.09%
CHEMBL1929 P47989 Xanthine dehydrogenase 83.28% 96.12%
CHEMBL4530 P00488 Coagulation factor XIII 83.19% 96.00%
CHEMBL2345 P51812 Ribosomal protein S6 kinase alpha 3 82.82% 95.64%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.30% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Calophyllum pauciflorum
Garcinia kola

Cross-Links

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PubChem 44575314
LOTUS LTS0182461
wikiData Q105381762