(2S,3S)-8-[(R)-[(2S)-4,6-dihydroxy-2,3-dihydro-1-benzofuran-2-yl]-(3,4-dihydroxyphenyl)methyl]-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol

Details

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Internal ID 2953243f-dbd9-49db-85eb-d1fd6f26b9a0
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavans > Catechins
IUPAC Name (2S,3S)-8-[(R)-[(2S)-4,6-dihydroxy-2,3-dihydro-1-benzofuran-2-yl]-(3,4-dihydroxyphenyl)methyl]-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol
SMILES (Canonical) C1C(C(OC2=C1C(=CC(=C2C(C3CC4=C(C=C(C=C4O3)O)O)C5=CC(=C(C=C5)O)O)O)O)C6=CC(=C(C=C6)O)O)O
SMILES (Isomeric) C1[C@@H]([C@@H](OC2=C1C(=CC(=C2[C@H]([C@@H]3CC4=C(C=C(C=C4O3)O)O)C5=CC(=C(C=C5)O)O)O)O)C6=CC(=C(C=C6)O)O)O
InChI InChI=1S/C30H26O11/c31-14-7-19(34)15-10-26(40-25(15)8-14)27(12-1-3-17(32)21(36)5-12)28-23(38)11-20(35)16-9-24(39)29(41-30(16)28)13-2-4-18(33)22(37)6-13/h1-8,11,24,26-27,29,31-39H,9-10H2/t24-,26-,27-,29-/m0/s1
InChI Key YQTLJOBSWBOCRZ-CXXWFMJBSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C30H26O11
Molecular Weight 562.50 g/mol
Exact Mass 562.14751164 g/mol
Topological Polar Surface Area (TPSA) 201.00 Ų
XlogP 3.50
Atomic LogP (AlogP) 3.50
H-Bond Acceptor 11
H-Bond Donor 9
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3S)-8-[(R)-[(2S)-4,6-dihydroxy-2,3-dihydro-1-benzofuran-2-yl]-(3,4-dihydroxyphenyl)methyl]-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9217 92.17%
Caco-2 - 0.9001 90.01%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.5905 59.05%
OATP2B1 inhibitior - 0.5663 56.63%
OATP1B1 inhibitior + 0.8597 85.97%
OATP1B3 inhibitior + 0.9398 93.98%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior + 0.9324 93.24%
P-glycoprotein inhibitior + 0.7200 72.00%
P-glycoprotein substrate - 0.6487 64.87%
CYP3A4 substrate + 0.5751 57.51%
CYP2C9 substrate - 0.5994 59.94%
CYP2D6 substrate + 0.5264 52.64%
CYP3A4 inhibition - 0.7748 77.48%
CYP2C9 inhibition - 0.8402 84.02%
CYP2C19 inhibition - 0.8339 83.39%
CYP2D6 inhibition - 0.8578 85.78%
CYP1A2 inhibition - 0.8328 83.28%
CYP2C8 inhibition + 0.5531 55.31%
CYP inhibitory promiscuity - 0.7472 74.72%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.4774 47.74%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.8365 83.65%
Skin irritation - 0.6388 63.88%
Skin corrosion - 0.9317 93.17%
Ames mutagenesis - 0.5200 52.00%
Human Ether-a-go-go-Related Gene inhibition + 0.9297 92.97%
Micronuclear + 0.8159 81.59%
Hepatotoxicity - 0.7375 73.75%
skin sensitisation - 0.7743 77.43%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity - 0.6990 69.90%
Acute Oral Toxicity (c) IV 0.4356 43.56%
Estrogen receptor binding + 0.7755 77.55%
Androgen receptor binding + 0.7898 78.98%
Thyroid receptor binding + 0.6264 62.64%
Glucocorticoid receptor binding + 0.5997 59.97%
Aromatase binding - 0.5207 52.07%
PPAR gamma + 0.7454 74.54%
Honey bee toxicity - 0.6534 65.34%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.7493 74.93%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.39% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 97.30% 91.49%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.22% 96.09%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 93.44% 93.40%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.35% 94.45%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 92.98% 99.15%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.72% 97.09%
CHEMBL2581 P07339 Cathepsin D 91.28% 98.95%
CHEMBL1929 P47989 Xanthine dehydrogenase 89.56% 96.12%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 88.68% 97.23%
CHEMBL2535 P11166 Glucose transporter 88.66% 98.75%
CHEMBL3004 P33527 Multidrug resistance-associated protein 1 88.61% 96.37%
CHEMBL2553 Q15418 Ribosomal protein S6 kinase alpha 1 87.54% 85.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.18% 89.00%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 84.60% 97.31%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.29% 95.89%
CHEMBL236 P41143 Delta opioid receptor 84.21% 99.35%
CHEMBL3401 O75469 Pregnane X receptor 84.14% 94.73%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 83.03% 95.56%
CHEMBL3194 P02766 Transthyretin 82.55% 90.71%
CHEMBL4208 P20618 Proteasome component C5 82.47% 90.00%
CHEMBL3830 Q2M2I8 Adaptor-associated kinase 82.06% 83.10%
CHEMBL3192 Q9BY41 Histone deacetylase 8 81.64% 93.99%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 80.67% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Uncaria gambir

Cross-Links

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PubChem 101438322
NPASS NPC273791